Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C06
         (390 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormo...    42   8e-06
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          23   5.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   5.2  

>DQ388479-1|ABD43194.1|   79|Anopheles gambiae adipokinetic hormone
           I preproprotein protein.
          Length = 79

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
 Frame = +2

Query: 5   FTXLFLVLACFIMAEAQLTFTSSWGGKR---------AAIAGTVSCRND-ESLASIYKLI 154
           FT L +  +  ++ EAQLTFT +WG +           +  G  +C+   +SL  IY++I
Sbjct: 7   FTVLLICASLMLITEAQLTFTPAWGKRSQGAMGINPLGSTFGQDACKTPVDSLLVIYRMI 66

Query: 155 QNEAEKLLLCQK 190
           Q EA+K++ C +
Sbjct: 67  QAEAQKIVDCSQ 78


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +2

Query: 5   FTXLFLVLACFIMAEAQLTFTSSWGGKRAAIAGTVSCRNDESLASIYKLIQNEA 166
           FT L  ++AC  +AEA+ TF      K  A  G        SL     L+QNE+
Sbjct: 5   FTVLLAIVACCAVAEAK-TFGKCELAKALANNGIAKA----SLPDWVCLVQNES 53


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 193 LSRHHRNGNTDKMPFNHYIIFS*SMKCI 276
           L+ HHRN +T +M     +IF   + CI
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCI 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,569
Number of Sequences: 2352
Number of extensions: 6459
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)