Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C05
         (460 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3SK01 Cluster: Putative diguanylate cyclase/phosphodie...    32   5.2  
UniRef50_Q556C7 Cluster: Putative uncharacterized protein; n=2; ...    32   5.2  
UniRef50_Q5KJH6 Cluster: Suppressor protein SPT23, putative; n=2...    32   5.2  
UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p...    32   6.8  
UniRef50_Q9Y2K1 Cluster: Zinc finger and BTB domain-containing p...    31   9.0  

>UniRef50_Q3SK01 Cluster: Putative diguanylate
           cyclase/phosphodiesterase (GGDEF & EAL domains) with
           PAS/PAC and GAF sensor; n=1; Thiobacillus denitrificans
           ATCC 25259|Rep: Putative diguanylate
           cyclase/phosphodiesterase (GGDEF & EAL domains) with
           PAS/PAC and GAF sensor - Thiobacillus denitrificans
           (strain ATCC 25259)
          Length = 1059

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -2

Query: 153 PSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 40
           P+  ++  R++  H++ NG ++ L ++GT LV E H T
Sbjct: 547 PTAFRENTRKVIAHSEWNGEITQLRKDGTALVVEAHWT 584


>UniRef50_Q556C7 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 511

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 9   ISHRVSVVTCLCGVAPELNQCHFVPGRIQSHCVSRGSASVGRH 137
           ISH +S    L  +   +N+ H +P  I S  V +GSA +  H
Sbjct: 360 ISHSLSQSIRLSLIEENINKLHVIPKNIPSQLVKKGSAGITNH 402


>UniRef50_Q5KJH6 Cluster: Suppressor protein SPT23, putative; n=2;
            Filobasidiella neoformans|Rep: Suppressor protein SPT23,
            putative - Cryptococcus neoformans (Filobasidiella
            neoformans)
          Length = 1417

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 88   GYSPIAFRV--GLHPSAAILVAAGAWLLPATKW 180
            GY+P+AF    G H  A +L+ AGAW   AT +
Sbjct: 998  GYTPLAFAALCGRHTCARVLIEAGAWYDRATNY 1030


>UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p -
           Drosophila melanogaster (Fruit fly)
          Length = 1071

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 30  VTCLCGVAPELNQCHFVPGRIQSHCVSRGSASVGRH 137
           + C CG+   L QC  +P  + +HC   G+ S  RH
Sbjct: 653 IVCSCGLQGRLEQCQPLPSYMHAHCTLPGARSY-RH 687


>UniRef50_Q9Y2K1 Cluster: Zinc finger and BTB domain-containing
           protein 1; n=24; Tetrapoda|Rep: Zinc finger and BTB
           domain-containing protein 1 - Homo sapiens (Human)
          Length = 713

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 132 GRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQKHDD 13
           GR++Q HA+R G   DL  NG G   E      +P +  +
Sbjct: 460 GRQLQEHAQRCGEPQDLTMNGLGNTEEKMDLEENPDEQSE 499


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,203,848
Number of Sequences: 1657284
Number of extensions: 6909636
Number of successful extensions: 19490
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19487
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)