Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C04
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.65 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = -2

Query: 435 HCISFAIQIYILVHCLLF-PFLSLHQEEAHT*SLNSICLYFLYLVMLCSHVDPVLFHIVI 259
           H +      Y  VH L + PF+       H   L +   Y+ ++++LC +     F I  
Sbjct: 69  HLLFLLCSGYFTVHLLFYCPFIIF---TVHF-LLCTYYFYYAFIILLCVYYFYYAFIIFT 124

Query: 258 AILLVFSCMHLFSV 217
             LL   C++ F V
Sbjct: 125 VHLLFLLCIYYFVV 138



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/62 (19%), Positives = 27/62 (43%)
 Frame = -2

Query: 408 YILVHCLLFPFLSLHQEEAHT*SLNSICLYFLYLVMLCSHVDPVLFHIVIAILLVFSCMH 229
           Y  +H L  P +          +++ +  Y + +++LC +     F +    LL+  C++
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIFTIH-LLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIY 259

Query: 228 LF 223
            F
Sbjct: 260 YF 261


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 483 PFGILVRNVRCIKCHKWGHINTDKEC 560
           PFG LV     ++C + G  +  + C
Sbjct: 65  PFGCLVGTPETLRCQREGFFHEREPC 90


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 342 SLNSICLYFLYLVMLCSHVDPVLFHIVIAILLVFSCMH 229
           SL  + ++ LYL++LC  +      IV+ +  V S ++
Sbjct: 201 SLVQLWIFQLYLLILCDQILREFDQIVVILSKVKSILN 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,902
Number of Sequences: 336
Number of extensions: 3045
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)