Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C03
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 435 PRSLIHPQVNKEWSSIFS*KHIP 367
           PR+   PQV  +W S     H+P
Sbjct: 265 PRTDFKPQVLPQWPSPIGASHLP 287


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -1

Query: 332 KLGSVLNIKGIQSIFIFQRFAFSLQFEGLTIWV*RFLHALLDF-XFYXLYRTXTCNVKLA 156
           + GS+L + G+  I+IF  F       G+   +  +LH +      + ++    CNV   
Sbjct: 77  QFGSILALFGVVQIYIFSGFIVP---SGVVYKIGYWLHQICHICELHTIF--LVCNVLTV 131

Query: 155 ERLRARD 135
            ++R +D
Sbjct: 132 FKIRYKD 138


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 409 KQRVVQHIQLKTHSAKILEVQDLLKKSLDPS 317
           +Q   Q I+ +THS+      D +K SLD S
Sbjct: 89  QQEKQQKIEQQTHSSIHQHHHDPMKMSLDKS 119


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 598 YWLFALYVAYHV 633
           YWLF  ++ +HV
Sbjct: 599 YWLFHCHIEFHV 610


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 409 KQRVVQHIQLKTHSAKILEVQDLLKKSLDPS 317
           +Q   Q I+ +THS+      D +K SLD S
Sbjct: 240 QQEKQQKIEQQTHSSIHQHHHDPMKMSLDKS 270


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 409 KQRVVQHIQLKTHSAKILEVQDLLKKSLDPS 317
           +Q   Q I+ +THS+      D +K SLD S
Sbjct: 299 QQEKQQKIEQQTHSSIHQHHHDPMKMSLDKS 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,956
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)