Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C02
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF059571-1|AAC17875.1|  822|Drosophila melanogaster faint sausag...    33   0.32 
AE013599-1756|AAF58341.2|  822|Drosophila melanogaster CG17716-P...    33   0.32 
AY119019-1|AAM50879.1|  318|Drosophila melanogaster LP04690p pro...    30   3.9  
AE014296-1071|AAX52760.1|  318|Drosophila melanogaster CG12755-P...    30   3.9  
AE014296-1070|AAN12238.2|  653|Drosophila melanogaster CG12755-P...    29   5.2  
Z47722-1|CAA87654.1|  796|Drosophila melanogaster MBN protein.         29   6.9  

>AF059571-1|AAC17875.1|  822|Drosophila melanogaster faint sausage
           protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +1

Query: 181 AEPADGVLLQSPSTK-LLINDQELGTATLYIT--ENNVIWGGGVSPSGNPAPTIN---LL 342
           A P   V+L  P    LLI+ + L  + L++   EN+ +    VS  GNP PT+    LL
Sbjct: 325 ARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLL 384

Query: 343 YPSISLHA 366
            P +  HA
Sbjct: 385 SPGVDRHA 392


>AE013599-1756|AAF58341.2|  822|Drosophila melanogaster CG17716-PA
           protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
 Frame = +1

Query: 181 AEPADGVLLQSPSTK-LLINDQELGTATLYIT--ENNVIWGGGVSPSGNPAPTIN---LL 342
           A P   V+L  P    LLI+ + L  + L++   EN+ +    VS  GNP PT+    LL
Sbjct: 325 ARPVKLVVLDRPKPPYLLIDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLL 384

Query: 343 YPSISLHA 366
            P +  HA
Sbjct: 385 SPGVDRHA 392


>AY119019-1|AAM50879.1|  318|Drosophila melanogaster LP04690p
           protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 22/110 (20%), Positives = 48/110 (43%)
 Frame = +1

Query: 211 SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 390
           +P+TK +     +  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 196 APNTKTIELGLNIAMSTYYTTKNAVTGHVSTQTSNSQTPSANTKI-DYNVGVVEK-ASPP 253

Query: 391 LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQ 540
           +Y  LN  L   ++ +QA +             QP+ +   +P +++ ++
Sbjct: 254 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQHNIR 302


>AE014296-1071|AAX52760.1|  318|Drosophila melanogaster CG12755-PC,
           isoform C protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 22/110 (20%), Positives = 48/110 (43%)
 Frame = +1

Query: 211 SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 390
           +P+TK +     +  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 196 APNTKTIELGLNIAMSTYYTTKNAVTGHVSTQTSNSQTPSANTKI-DYNVGVVEK-ASPP 253

Query: 391 LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQ 540
           +Y  LN  L   ++ +QA +             QP+ +   +P +++ ++
Sbjct: 254 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQHNIR 302


>AE014296-1070|AAN12238.2|  653|Drosophila melanogaster CG12755-PB,
           isoform B protein.
          Length = 653

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 23/112 (20%), Positives = 49/112 (43%)
 Frame = +1

Query: 211 SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 390
           +P+TK +     +  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 196 APNTKTIELGLNIAMSTYYTTKNAVTGHVSTQTSNSQTPSANTKI-DYNVGVVEK-ASPP 253

Query: 391 LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQAM 546
           +Y  LN  L   ++ +QA +             QP+ +   +P ++ ++ A+
Sbjct: 254 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQVKIFAL 304


>Z47722-1|CAA87654.1|  796|Drosophila melanogaster MBN protein.
          Length = 796

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 24/112 (21%), Positives = 49/112 (43%)
 Frame = +1

Query: 211 SPSTKLLINDQELGTATLYITENNVIWGGGVSPSGNPAPTINLLYPSISLHAIQREPSPA 390
           +P+TK +     L  +T Y T+N V        S +  P+ N      ++  +++  SP 
Sbjct: 360 APNTKTIELGLNLAMSTYYTTKNAVTGHVSRQTSNSQTPSANTKI-DYNVGVVEK-ASPP 417

Query: 391 LYMVLNYELRLPELSQQAGSTXXXXXXXXXXXXQPITQLRFIPENENELQAM 546
           +Y  LN  L   ++ +QA +             QP+ +   +P ++ ++ A+
Sbjct: 418 VYRPLNIRLN-EDVMRQAITYGNTIPGHVPLPNQPLVETSLLPASQVKIFAL 468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,974,314
Number of Sequences: 53049
Number of extensions: 575788
Number of successful extensions: 1451
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)