Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B22
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 93 2e-19
02_05_0591 - 30183105-30183869 71 1e-12
06_01_1181 + 10148653-10149405 69 4e-12
03_04_0055 + 16891212-16891848,16893166-16893206 69 5e-12
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 66 3e-11
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 66 3e-11
08_01_0498 - 4327502-4328395 65 6e-11
01_07_0092 - 41021743-41022276 64 1e-10
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 63 2e-10
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 62 3e-10
01_07_0091 - 41013837-41014271 58 7e-09
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 57 2e-08
02_05_0592 - 30210219-30210757,30210898-30210919 45 7e-05
06_03_1339 + 29445324-29445395,29445487-29445598,29445673-294457... 31 0.67
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/89 (47%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
+++++LP++++ K+IKE++P VRVA ++++L++ CC EFI+L+SSE+NEVC++ +KKTI
Sbjct: 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKTI 70
Query: 293 NAEHVLTALDRLGFSDYTIEAEAVLKDCK 379
EHVL AL LGF +Y E +A + K
Sbjct: 71 APEHVLRALQDLGFREYIEEVQAAYEHHK 99
>02_05_0591 - 30183105-30183869
Length = 254
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +2
Query: 77 GSPERELCPPPSEEDELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSE 253
G+ + P E+D L +P A++ ++++ ++P+ +++ +++E I C +E+I I+ E
Sbjct: 20 GAQQAAAAPAIREQDRL-MPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFITGE 78
Query: 254 ANEVCNQSNKKTINAEHVLTALDRLGFSDY 343
ANE C + +KTI AE VL A+ RLGF DY
Sbjct: 79 ANERCQREQRKTITAEDVLWAMSRLGFDDY 108
>06_01_1181 + 10148653-10149405
Length = 250
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/87 (34%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +2
Query: 113 EEDELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKT 289
E+D L +P A++ ++++ ++P +++ +++E+I C +EFI ++ EAN+ C++ ++KT
Sbjct: 31 EQDRL-MPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVTGEANDRCHREHRKT 89
Query: 290 INAEHVLTALDRLGFSDYTIEAEAVLK 370
+ AE ++ A+DRLGF DY A L+
Sbjct: 90 VTAEDLVWAMDRLGFDDYVPPLTAYLR 116
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 68.5 bits (160), Expect = 5e-12
Identities = 32/103 (31%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 107 PSEEDELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNK 283
P E+D LP A++++++K+ +P+ +++ +++E + C +EFI I+ EA++ C + +
Sbjct: 22 PREQDRF-LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 80
Query: 284 KTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQST 412
KTIN + +L A+ LGF DY + L + + +R ST
Sbjct: 81 KTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAAAST 123
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
E + LP A+I++++K+ +P+ ++A +++E + C +EFI I+SEA++ C + +KTI
Sbjct: 38 EQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 97
Query: 293 NAEHVLTALDRLGFSDY 343
N + +L A+ LGF DY
Sbjct: 98 NGDDLLWAMATLGFEDY 114
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +2
Query: 101 PPPS---EEDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVC 268
PP S E + LP A+I++++K+ VP+ ++A +++E + C +EFI ++SEA++ C
Sbjct: 12 PPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKC 71
Query: 269 NQSNKKTINAEHVLTALDRLGFSDY 343
+ +KTIN E +L A+ LGF +Y
Sbjct: 72 QKEKRKTINGEDLLFAMGTLGFEEY 96
>08_01_0498 - 4327502-4328395
Length = 297
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/80 (33%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +2
Query: 107 PSEEDELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNK 283
P++E + LP A++++++K +P+ +++ ES+E + C +EFI ++ EA++ C + +
Sbjct: 55 PAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDKCQREKR 114
Query: 284 KTINAEHVLTALDRLGFSDY 343
KTIN + +L A+ LGF Y
Sbjct: 115 KTINGDDLLWAMTTLGFEAY 134
>01_07_0092 - 41021743-41022276
Length = 177
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/78 (34%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +2
Query: 113 EEDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKT 289
E+D L LP A++ +++K+++P + +++ E++E + C +EFI ++ EA++ C++ +KT
Sbjct: 34 EQDRL-LPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 92
Query: 290 INAEHVLTALDRLGFSDY 343
+N + V A LGF DY
Sbjct: 93 VNGDDVCWAFGALGFDDY 110
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/79 (32%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 110 SEEDELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKK 286
+ E + LP A++++++K +P+ +++ +++E + C +EFI I+ EA++ C + +K
Sbjct: 20 AREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRK 79
Query: 287 TINAEHVLTALDRLGFSDY 343
TIN + +L A+ LGF DY
Sbjct: 80 TINGDDLLWAMTTLGFEDY 98
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +2
Query: 113 EEDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKT 289
+E + LP A+I ++++ VP + ++A +S+E + C +EFI I+SEA++ C + +KT
Sbjct: 21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKT 80
Query: 290 INAEHVLTALDRLGFSDY 343
IN + ++ ++ LGF DY
Sbjct: 81 INGDDLIWSMGTLGFEDY 98
>01_07_0091 - 41013837-41014271
Length = 144
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKE-LVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
+D L LP A++ +++K+ L P +++ ++E I C TEFI ++ EA+E C + +KT+
Sbjct: 5 QDNL-LPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTV 63
Query: 293 NAEHVLTALDRLGFSDY 343
N + V A+ LG Y
Sbjct: 64 NGDDVCHAMRSLGLDHY 80
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Frame = +2
Query: 110 SEEDELTLPRASINKMIKELVPSVRVAFESRELILN---------CCTEFIHLISSEANE 262
+E + LP+A + +++KE + +VA E+I+N FIH +S+ AN+
Sbjct: 29 AEAEVEELPKAIVRRLVKEKL--AQVAAGGAEVIVNKDAMSAFAESARIFIHYLSATAND 86
Query: 263 VCNQSNKKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTR 415
+C +S ++TINA+ VL ALD + F ++ L++ + A RR ++T+
Sbjct: 87 MCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEFRNKNAARRSETTQ 137
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 131 LPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHV 307
LP A++ ++IK+++P ++ ++ L +C EF+ + EA+E +++T+ E
Sbjct: 34 LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDY 93
Query: 308 LTALDRLGFSDYTIEAEAVL 367
L + LGF Y +A +
Sbjct: 94 LGSFGDLGFDRYVDPMDAYI 113
>06_03_1339 +
29445324-29445395,29445487-29445598,29445673-29445756,
29446156-29446182,29446879-29446966,29447070-29447151,
29447414-29447434,29448412-29448605,29449419-29449560,
29449805-29449889,29450123-29450250,29450940-29451032,
29451095-29451327,29453384-29453564,29454122-29454169
Length = 529
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
Frame = +2
Query: 125 LTLP-RASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAE 301
L LP A ++ +I LV VR F R L C S+ + +VC + ++
Sbjct: 134 LCLPTEADVDDLILWLVGFVRKIFVLRASNLACELFVAQTDSAGSGDVCLSQDSDDVHIS 193
Query: 302 HVLTALDRL--GFSDYTIEAEAVLKDCKAVAAKRRR 403
+++DRL G DY + C+A R R
Sbjct: 194 ITTSSIDRLVSGLKDYALSHANTSDRCEACYMNRDR 229
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,691,951
Number of Sequences: 37544
Number of extensions: 211124
Number of successful extensions: 565
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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