Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B22
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of trans... 167 3e-41
M97388-1|AAA58442.1| 176|Homo sapiens TATA binding protein-asso... 166 6e-41
BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of trans... 166 6e-41
BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein. 166 6e-41
BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of trans... 166 6e-41
BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of trans... 166 6e-41
AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of trans... 166 6e-41
X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding prot... 69 1e-11
L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding pro... 69 1e-11
BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription f... 69 1e-11
BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription f... 69 1e-11
BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription f... 69 1e-11
AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens ... 53 9e-07
DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directe... 51 4e-06
BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directe... 51 4e-06
BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directe... 51 4e-06
AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directe... 51 4e-06
AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens ... 51 4e-06
AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon ... 51 4e-06
AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein. 51 4e-06
AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated ... 51 5e-06
AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens ... 51 5e-06
BC062798-1|AAH62798.1| 88|Homo sapiens chromosome 6 open readi... 35 0.25
BC046178-1|AAH46178.1| 88|Homo sapiens chromosome 6 open readi... 35 0.25
BC039556-1|AAH39556.1| 88|Homo sapiens chromosome 6 open readi... 35 0.25
BC017928-1|AAH17928.1| 88|Homo sapiens chromosome 6 open readi... 35 0.25
AY902475-1|AAW82474.1| 88|Homo sapiens CUG2 protein. 35 0.25
AL136968-3|CAI19704.1| 141|Homo sapiens protein ( Human DNA seq... 34 0.43
>AK223442-1|BAD97162.1| 176|Homo sapiens down-regulator of
transcription 1 variant protein.
Length = 176
Score = 167 bits (407), Expect = 3e-41
Identities = 78/123 (63%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRRR S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRRASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>M97388-1|AAA58442.1| 176|Homo sapiens TATA binding
protein-associated phosphoprotein protein.
Length = 176
Score = 166 bits (404), Expect = 6e-41
Identities = 77/123 (62%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRR+ S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>BT006972-1|AAP35618.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 166 bits (404), Expect = 6e-41
Identities = 77/123 (62%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRR+ S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>BC068553-1|AAH68553.1| 176|Homo sapiens DR1 protein protein.
Length = 176
Score = 166 bits (404), Expect = 6e-41
Identities = 77/123 (62%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRR+ S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>BC035507-1|AAH35507.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 166 bits (404), Expect = 6e-41
Identities = 77/123 (62%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRR+ S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>BC002809-1|AAH02809.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 166 bits (404), Expect = 6e-41
Identities = 77/123 (62%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRR+ S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>AL137159-1|CAC17578.1| 176|Homo sapiens down-regulator of
transcription 1, TBP-binding (negative cofactor 2)
protein.
Length = 176
Score = 166 bits (404), Expect = 6e-41
Identities = 77/123 (62%), Positives = 97/123 (78%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
+D+LT+PRA+INKMIKE +P+VRVA ++REL++NCCTEFIHLISSEANE+CN+S KKTI+
Sbjct: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXXXXXFA 475
EHV+ AL+ LGF Y E + VL++CK VA KRR+ S+RLENLGIP FA
Sbjct: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFA 127
Query: 476 KAR 484
KAR
Sbjct: 128 KAR 130
>X59710-1|CAA42230.1| 205|Homo sapiens CAAT-box DNA binding protein
subunit B (NF-YB) protein.
Length = 205
Score = 69.3 bits (162), Expect = 1e-11
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
E ++ LP A++ +++K +P ++A +++E + C +EFI I+SEA+E C+Q +KTI
Sbjct: 52 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 111
Query: 293 NAEHVLTALDRLGFSDY 343
N E +L A+ LGF Y
Sbjct: 112 NGEDILFAMSTLGFDSY 128
>L06145-1|AAA59930.1| 207|Homo sapiens CCAAT-box DNA binding
protein subunit NF-YB. protein.
Length = 207
Score = 69.3 bits (162), Expect = 1e-11
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
E ++ LP A++ +++K +P ++A +++E + C +EFI I+SEA+E C+Q +KTI
Sbjct: 54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 293 NAEHVLTALDRLGFSDY 343
N E +L A+ LGF Y
Sbjct: 114 NGEDILFAMSTLGFDSY 130
>BC007035-1|AAH07035.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 69.3 bits (162), Expect = 1e-11
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
E ++ LP A++ +++K +P ++A +++E + C +EFI I+SEA+E C+Q +KTI
Sbjct: 54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 293 NAEHVLTALDRLGFSDY 343
N E +L A+ LGF Y
Sbjct: 114 NGEDILFAMSTLGFDSY 130
>BC005317-1|AAH05317.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 69.3 bits (162), Expect = 1e-11
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
E ++ LP A++ +++K +P ++A +++E + C +EFI I+SEA+E C+Q +KTI
Sbjct: 54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 293 NAEHVLTALDRLGFSDY 343
N E +L A+ LGF Y
Sbjct: 114 NGEDILFAMSTLGFDSY 130
>BC005316-1|AAH05316.1| 207|Homo sapiens nuclear transcription
factor Y, beta protein.
Length = 207
Score = 69.3 bits (162), Expect = 1e-11
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 116 EDELTLPRASINKMIKELVPSV-RVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
E ++ LP A++ +++K +P ++A +++E + C +EFI I+SEA+E C+Q +KTI
Sbjct: 54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 293 NAEHVLTALDRLGFSDY 343
N E +L A+ LGF Y
Sbjct: 114 NGEDILFAMSTLGFDSY 130
>AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90281 fis, clone NT2RP1000468, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A . ).
Length = 147
Score = 53.2 bits (122), Expect = 9e-07
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + I LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFVIP----LKE--ALEAYRREQKGKKE 101
>DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90148 fis, clone HEMBB1001959, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon p17
subunit protein.
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein.
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN + +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated
protein protein.
Length = 147
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMNGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90301 fis, clone NT2RP2000610, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +2
Query: 119 DELTLPRASINKMIKELVPS-VRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTIN 295
++L LP A I ++IKE +P V ++ E+R I + F+ +S AN +KT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMNGKRKTLN 65
Query: 296 AEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLE 421
A VL+A++ + F + LK+ A+ A RR Q + E
Sbjct: 66 ASDVLSAMEEMEFQRFV----TPLKE--ALEAYRREQKGKKE 101
>BC062798-1|AAH62798.1| 88|Homo sapiens chromosome 6 open reading
frame 173 protein.
Length = 88
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 134 PRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLT 313
PR + ++ K P +R+ L+ C F+H ++ E+ S + IN EHVL
Sbjct: 18 PRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVINKEHVLA 77
Query: 314 A 316
A
Sbjct: 78 A 78
>BC046178-1|AAH46178.1| 88|Homo sapiens chromosome 6 open reading
frame 173 protein.
Length = 88
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 134 PRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLT 313
PR + ++ K P +R+ L+ C F+H ++ E+ S + IN EHVL
Sbjct: 18 PRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVINKEHVLA 77
Query: 314 A 316
A
Sbjct: 78 A 78
>BC039556-1|AAH39556.1| 88|Homo sapiens chromosome 6 open reading
frame 173 protein.
Length = 88
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 134 PRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLT 313
PR + ++ K P +R+ L+ C F+H ++ E+ S + IN EHVL
Sbjct: 18 PRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVINKEHVLA 77
Query: 314 A 316
A
Sbjct: 78 A 78
>BC017928-1|AAH17928.1| 88|Homo sapiens chromosome 6 open reading
frame 173 protein.
Length = 88
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 134 PRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLT 313
PR + ++ K P +R+ L+ C F+H ++ E+ S + IN EHVL
Sbjct: 18 PRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVINKEHVLA 77
Query: 314 A 316
A
Sbjct: 78 A 78
>AY902475-1|AAW82474.1| 88|Homo sapiens CUG2 protein.
Length = 88
Score = 35.1 bits (77), Expect = 0.25
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 134 PRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLT 313
PR + ++ K P +R+ L+ C F+H ++ E+ S + IN EHVL
Sbjct: 18 PRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRTNACASKCRVINKEHVLA 77
Query: 314 A 316
A
Sbjct: 78 A 78
>AL136968-3|CAI19704.1| 141|Homo sapiens protein ( Human DNA
sequence from clone RP1-182O16 on chromosome 6 Contains
the 5' end of a novel protein, a ribosomal protein L34
pseudogene, anthe 3' e).
Length = 141
Score = 34.3 bits (75), Expect = 0.43
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +2
Query: 53 GVHKFVTMGSPERELCP---PPSEEDELTLPRASINKMIKELVPSVRVAFESRELILNCC 223
G H+ V++GS LC P DE T R ++ + E VP R ++R I +C
Sbjct: 43 GTHRAVSLGSSSHHLCTGRLSPPLRDEETEERCNLGQRPLEAVPDPRQIRQTRAAISSCM 102
Query: 224 TEF 232
F
Sbjct: 103 DSF 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,678,632
Number of Sequences: 237096
Number of extensions: 1258625
Number of successful extensions: 3014
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3014
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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