Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B22
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF302257-1|AAG15388.1|  183|Drosophila melanogaster NC2beta prot...   213   3e-55
AE014134-2547|AAF53428.1|  183|Drosophila melanogaster CG4185-PA...   213   3e-55
DQ138728-1|ABA86334.1|  169|Drosophila melanogaster CG4185 protein.   203   2e-52
AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p pro...    59   5e-09
AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p pro...    59   5e-09
AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-P...    59   5e-09
AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA...    31   1.2  
AE014297-4271|AAF56818.1| 1222|Drosophila melanogaster CG1647-PA...    30   3.5  

>AF302257-1|AAG15388.1|  183|Drosophila melanogaster NC2beta
           protein.
          Length = 183

 Score =  213 bits (519), Expect = 3e-55
 Identities = 105/137 (76%), Positives = 113/137 (82%)
 Frame = +2

Query: 74  MGSPERELCPPPSEEDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSE 253
           M +P+ EL PP +E+DELTLPRASINK+IKELVP+VRVA ESRELILNCC+EFIHLISSE
Sbjct: 1   MSNPQEELLPPSAEDDELTLPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSE 60

Query: 254 ANEVCNQSNKKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGI 433
           ANEVCN  NKKTINAEHVL AL+RLGF DY  EAEAVL DCK VAAKRRRQSTRLENLGI
Sbjct: 61  ANEVCNMRNKKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGI 120

Query: 434 PXXXXXXXXXXXFAKAR 484
           P           FAKAR
Sbjct: 121 PEEELLRQQQELFAKAR 137


>AE014134-2547|AAF53428.1|  183|Drosophila melanogaster CG4185-PA
           protein.
          Length = 183

 Score =  213 bits (519), Expect = 3e-55
 Identities = 105/137 (76%), Positives = 113/137 (82%)
 Frame = +2

Query: 74  MGSPERELCPPPSEEDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSE 253
           M +P+ EL PP +E+DELTLPRASINK+IKELVP+VRVA ESRELILNCC+EFIHLISSE
Sbjct: 1   MSNPQEELLPPSAEDDELTLPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSE 60

Query: 254 ANEVCNQSNKKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGI 433
           ANEVCN  NKKTINAEHVL AL+RLGF DY  EAEAVL DCK VAAKRRRQSTRLENLGI
Sbjct: 61  ANEVCNMRNKKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGI 120

Query: 434 PXXXXXXXXXXXFAKAR 484
           P           FAKAR
Sbjct: 121 PEEELLRQQQELFAKAR 137


>DQ138728-1|ABA86334.1|  169|Drosophila melanogaster CG4185 protein.
          Length = 169

 Score =  203 bits (496), Expect = 2e-52
 Identities = 101/128 (78%), Positives = 107/128 (83%)
 Frame = +2

Query: 101 PPPSEEDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSN 280
           PP +E+DELTLPRASINK+IKELVP+VRVA ESRELILNCC+EFIHLISSEANEVCN  N
Sbjct: 2   PPSAEDDELTLPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNMRN 61

Query: 281 KKTINAEHVLTALDRLGFSDYTIEAEAVLKDCKAVAAKRRRQSTRLENLGIPXXXXXXXX 460
           KKTINAEHVL AL+RLGF DY  EAEAVL DCK VAAKRRRQSTRLENLGIP        
Sbjct: 62  KKTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGIPEEELLRQQ 121

Query: 461 XXXFAKAR 484
              FAKAR
Sbjct: 122 QELFAKAR 129


>AY094930-1|AAM11283.1|  156|Drosophila melanogaster RH50436p
           protein.
          Length = 156

 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 116 EDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
           E +  LP  +I K++K  VP + ++A ++RE I  C +EFI  ISSEA E     N+KT+
Sbjct: 38  EQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTV 97

Query: 293 NAEHVLTALDRLGFSDY 343
           N + +L A   LGF +Y
Sbjct: 98  NGDDLLVAFSNLGFDNY 114


>AY070968-1|AAL48590.1|  156|Drosophila melanogaster RE06807p
           protein.
          Length = 156

 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 116 EDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
           E +  LP  +I K++K  VP + ++A ++RE I  C +EFI  ISSEA E     N+KT+
Sbjct: 38  EQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTV 97

Query: 293 NAEHVLTALDRLGFSDY 343
           N + +L A   LGF +Y
Sbjct: 98  NGDDLLVAFSNLGFDNY 114


>AE014134-3154|AAF53839.2|  156|Drosophila melanogaster CG10447-PA
           protein.
          Length = 156

 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 116 EDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
           E +  LP  +I K++K  VP + ++A ++RE I  C +EFI  ISSEA E     N+KT+
Sbjct: 38  EQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTV 97

Query: 293 NAEHVLTALDRLGFSDY 343
           N + +L A   LGF +Y
Sbjct: 98  NGDDLLVAFSNLGFDNY 114


>AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA
            protein.
          Length = 2444

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +2

Query: 74   MGSPERELCPPPSEEDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISS 250
            +  P++E  PPP++    +L  + +  M +EL PS+   +  R + L        L+ S
Sbjct: 2188 LNEPKQEETPPPTKSSTKSLQDSMMRHMNRELTPSISEMYHDRNVGLGLAPPLSKLLLS 2246


>AE014297-4271|AAF56818.1| 1222|Drosophila melanogaster CG1647-PA
           protein.
          Length = 1222

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +2

Query: 107 PSEEDELTLPRASINKMIKELVP-SVRVAFESRELILNCCTEFIHLISSEANEVCNQSNK 283
           P+EED + L    +++ I ELV  +V V  +  + I + C + I+    E  E+C  +NK
Sbjct: 36  PNEEDTIDLDEPRMSQKIYELVGFTVSVDDKMPQTICSQCVDKINDF-YEFREMCYATNK 94

Query: 284 KTIN 295
           +T N
Sbjct: 95  QTRN 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,568,468
Number of Sequences: 53049
Number of extensions: 382603
Number of successful extensions: 1140
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)