Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B22
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical pr...   106   1e-23
AF025470-4|AAB71054.1|  403|Caenorhabditis elegans Hypothetical ...    64   9e-11
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical...    30   1.4  
Z47808-9|CAI46561.1|  425|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr...    29   2.4  

>Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical
           protein F53A2.5 protein.
          Length = 184

 Score =  106 bits (255), Expect = 1e-23
 Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = +2

Query: 113 EEDELTLPRASINKMIKELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
           E++E+ LP+  IN++IKE+VP +R+A ESR++I  CC EF+  I+ EA  + +Q  +KTI
Sbjct: 16  EDNEIGLPQKGINQIIKEVVPEMRIANESRDMINACCVEFVKHIAREAQRIASQDQRKTI 75

Query: 293 NAEHVLTALDRLGFS-DYTIEAEAVLKDCKAVAAKR-RRQSTRLENLGIPXXXXXXXXXX 466
             EHV  AL  LGF+ DY   A++VL  CK  A K+ RR+++RLE  GIP          
Sbjct: 76  YHEHVQKALQNLGFTPDYLEAADSVLDACKVEAEKKLRRKNSRLEKCGIPEEKLYEMQQE 135

Query: 467 XFAKAR 484
              KAR
Sbjct: 136 LIQKAR 141


>AF025470-4|AAB71054.1|  403|Caenorhabditis elegans Hypothetical
           protein W10D9.4 protein.
          Length = 403

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +2

Query: 116 EDELTLPRASINKMIK-ELVPSVRVAFESRELILNCCTEFIHLISSEANEVCNQSNKKTI 292
           + E  LP A++ +++K ++ P  ++A +++E    C +EFI  I+SEA E+CN + +KTI
Sbjct: 61  DQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTI 120

Query: 293 NAEHVLTALDRLGFSDY 343
            A+ +LTA++  GF +Y
Sbjct: 121 TADDLLTAMEATGFDNY 137


>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
           protein T05H4.3 protein.
          Length = 1152

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +2

Query: 197 SRELILNCCTEFIHLISSEANEVC---NQSNKKTINAEHVLTALDRLGFSDYTIEAEAVL 367
           S E+I+  C+   ++  +E + +      SN+K  +   +   LDR    DYT  A  ++
Sbjct: 391 SYEIIVKSCSVLGNITKNETDRLFILEKDSNEKLFDLRTIFNLLDRFTRKDYTKHAVRLI 450

Query: 368 KDCKAVAAKRR 400
           +D + +  + +
Sbjct: 451 RDFEVIKKQEK 461


>Z47808-9|CAI46561.1|  425|Caenorhabditis elegans Hypothetical
           protein D2013.8b protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 206 LILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLTALD 322
           +IL CC   I + S   N++     K TI A HV+   D
Sbjct: 138 VILGCCDGSIEIASISRNKLIGLYTKSTIGASHVVCRED 176


>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
           protein D2013.8a protein.
          Length = 1087

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2

Query: 206 LILNCCTEFIHLISSEANEVCNQSNKKTINAEHVLTALD 322
           +IL CC   I + S   N++     K TI A HV+   D
Sbjct: 800 VILGCCDGSIEIASISRNKLIGLYTKSTIGASHVVCRED 838


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,356,098
Number of Sequences: 27780
Number of extensions: 206209
Number of successful extensions: 540
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)