Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B21
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   1.00 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   1.00 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   4.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   7.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   7.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.0  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 234 KNMEKMINKNLITLKCVLFCFLSGVGCIFPFL 329
           +N   +INK LI ++C +   L+ +  +F FL
Sbjct: 80  ENNSLVINKRLIFIECFVMMALTLIVTLFTFL 111



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 532 YSVLSFILYFSLYHTRKDMRLVGLKFCSCVMRTARM*CKKFAKRTCVAIVGQVR 693
           Y ++SF+L+  L      +  +   F   +M       K F+K   V +V Q++
Sbjct: 147 YLIISFVLFSLLARVPVMLMTISADFIQQIMLFVSALIKAFSKYQFVVLVLQLQ 200


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 234 KNMEKMINKNLITLKCVLFCFLSGVGCIFPFL 329
           +N   +INK LI ++C +   L+ +  +F FL
Sbjct: 80  ENNSLVINKRLIFIECFVMMALTLIVTLFTFL 111



 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 532 YSVLSFILYFSLYHTRKDMRLVGLKFCSCVMRTARM*CKKFAKRTCVAIVGQVR 693
           Y ++SF+L+  L      +  +   F   +M       K F+K   V +V Q++
Sbjct: 147 YLIISFVLFSLLARVPVMLMTISADFIQQIMLFVSALIKAFSKYQFVVLVLQLQ 200


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -3

Query: 271 VMRFLFIIFSMFLRLSVV*NIPAYLGILNQ--GFSKILHYLLSLSVNCESFTTKII 110
           V+ F  I+F++ L  + +   P + G L     F+K+L +++SLS N   F   II
Sbjct: 45  VIIFHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVSLSGNSAVFIMLII 100


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 316 FFLFFRCTCFQW 351
           F LF+ C CF W
Sbjct: 319 FNLFYLCFCFYW 330


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 263 ILIYHFFHVFETFCC 219
           + IY+F+++   FCC
Sbjct: 256 VCIYYFYYMHLLFCC 270


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 316 FFLFFRCTCFQW 351
           F LF+ C CF W
Sbjct: 275 FNLFYLCFCFYW 286


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/50 (20%), Positives = 27/50 (54%)
 Frame = +3

Query: 510 IVTATCLILSTIFYSLLLTVPYTERHEARRPQVLFMCNADSAYVMQEVCK 659
           IV+ +  + ++++ +++    +TE   A  P  + +   +  Y++QEV +
Sbjct: 298 IVSISTSVSTSVYLAIVFNGLFTEEDVADVPINVTLSLDEKKYILQEVVR 347


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 769 NGWRIQVMFGSAQPYSQDPTXSTPDFSP 686
           NG+   +  GS  PYS +      D SP
Sbjct: 133 NGYSSPMSSGSYDPYSPNGKIGREDLSP 160


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 529 LYSVLSFILYFSLYHTRKDMRLVGLKFCSCVMRTAR 636
           LYS   FILYF L+ T K +     +  +C+M   R
Sbjct: 140 LYS--QFILYFLLFATLKILLGKYTQLKACLMEEKR 173


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 529 LYSVLSFILYFSLYHTRKDMRLVGLKFCSCVMRTAR 636
           LYS   FILYF L+ T K +     +  +C+M   R
Sbjct: 140 LYS--QFILYFLLFATLKILLGKYTQLKACLMEEKR 173


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 529 LYSVLSFILYFSLYHTRKDMRLVGLKFCSCVMRTAR 636
           LYS   FILYF L+ T K +     +  +C+M   R
Sbjct: 460 LYS--QFILYFLLFATLKILLGKYTQLKACLMEEKR 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,385
Number of Sequences: 336
Number of extensions: 4124
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)