Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B20
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05608-1|CAA29097.1| 544|Homo sapiens NF-L protein. 35 0.27
BC039237-1|AAH39237.1| 543|Homo sapiens neurofilament, light po... 35 0.27
AY156690-1|AAN74826.1| 543|Homo sapiens light molecular weight ... 35 0.27
X92121-1|CAA63089.1| 37|Homo sapiens Serine/Threonine phosphat... 31 5.8
X89416-1|CAA61595.1| 493|Homo sapiens protein phosphatase 5 pro... 31 5.8
U25174-1|AAB60384.1| 491|Homo sapiens serine-threonine phosphat... 31 5.8
BT007275-1|AAP35939.1| 499|Homo sapiens protein phosphatase 5, ... 31 5.8
BC053326-1|AAH53326.1| 497|Homo sapiens family with sequence si... 31 5.8
BC001970-1|AAH01970.1| 499|Homo sapiens protein phosphatase 5, ... 31 5.8
BC001831-1|AAH01831.4| 484|Homo sapiens PPP5C protein protein. 31 5.8
BC000750-1|AAH00750.4| 484|Homo sapiens PPP5C protein protein. 31 5.8
AK025808-1|BAB15241.1| 497|Homo sapiens protein ( Homo sapiens ... 31 5.8
AC007193-3|AAD22669.1| 499|Homo sapiens PPP5_HUMAN protein. 31 5.8
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein. 30 7.7
U53220-1|AAC50479.1| 80|Homo sapiens pRb2/p130 protein. 30 7.7
AK223222-1|BAD96942.1| 499|Homo sapiens protein phosphatase 5, ... 30 7.7
>X05608-1|CAA29097.1| 544|Homo sapiens NF-L protein.
Length = 544
Score = 35.1 bits (77), Expect = 0.27
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 364 DEPPAVGAADEQLRAETEANDSDAAESDGSRTESMAAARE 483
DEPP+ G A+E+ + + EA + +AAE + + E A+E
Sbjct: 469 DEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKE 508
>BC039237-1|AAH39237.1| 543|Homo sapiens neurofilament, light
polypeptide 68kDa protein.
Length = 543
Score = 35.1 bits (77), Expect = 0.27
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 364 DEPPAVGAADEQLRAETEANDSDAAESDGSRTESMAAARE 483
DEPP+ G A+E+ + + EA + +AAE + + E A+E
Sbjct: 468 DEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKE 507
>AY156690-1|AAN74826.1| 543|Homo sapiens light molecular weight
neurofilament protein protein.
Length = 543
Score = 35.1 bits (77), Expect = 0.27
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 364 DEPPAVGAADEQLRAETEANDSDAAESDGSRTESMAAARE 483
DEPP+ G A+E+ + + EA + +AAE + + E A+E
Sbjct: 468 DEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKE 507
>X92121-1|CAA63089.1| 37|Homo sapiens Serine/Threonine phosphatase
protein.
Length = 37
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 14 PPRDEPPADGALKRAEELKTQAND 37
>X89416-1|CAA61595.1| 493|Homo sapiens protein phosphatase 5
protein.
Length = 493
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 8 PPRDEPPADGALKRAEELKTQAND 31
>U25174-1|AAB60384.1| 491|Homo sapiens serine-threonine phosphatase
protein.
Length = 491
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 6 PPRDEPPADGALKRAEELKTQAND 29
>BT007275-1|AAP35939.1| 499|Homo sapiens protein phosphatase 5,
catalytic subunit protein.
Length = 499
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 14 PPRDEPPADGALKRAEELKTQAND 37
>BC053326-1|AAH53326.1| 497|Homo sapiens family with sequence
similarity 134, member B protein.
Length = 497
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 346 QTSPPADEPPAVGAADEQLRAETEANDSDAAESDGSRTESMA 471
+ +PP+ PP A+ Q + E EA ++ AAE G + E A
Sbjct: 21 EQAPPSPPPPQASPAERQ-QQEEEAQEAGAAEGAGLQVEEAA 61
>BC001970-1|AAH01970.1| 499|Homo sapiens protein phosphatase 5,
catalytic subunit protein.
Length = 499
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 14 PPRDEPPADGALKRAEELKTQAND 37
>BC001831-1|AAH01831.4| 484|Homo sapiens PPP5C protein protein.
Length = 484
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 12 PPRDEPPADGALKRAEELKTQAND 35
>BC000750-1|AAH00750.4| 484|Homo sapiens PPP5C protein protein.
Length = 484
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 12 PPRDEPPADGALKRAEELKTQAND 35
>AK025808-1|BAB15241.1| 497|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22155 fis, clone HRC00205. ).
Length = 497
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 346 QTSPPADEPPAVGAADEQLRAETEANDSDAAESDGSRTESMA 471
+ +PP+ PP A+ Q + E EA ++ AAE G + E A
Sbjct: 21 EQAPPSPPPPQASPAERQ-QQEEEAQEAGAAEGAGLQVEEAA 61
>AC007193-3|AAD22669.1| 499|Homo sapiens PPP5_HUMAN protein.
Length = 499
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 14 PPRDEPPADGALKRAEELKTQAND 37
>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
Length = 1139
Score = 30.3 bits (65), Expect = 7.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 346 QTSPPADEPPAVGAADEQLRAETEAND-SDAAES 444
Q+ PP PPA A+DE+ + EA D + +AES
Sbjct: 7 QSPPPPPPPPAAAASDEEEEDDGEAEDAAPSAES 40
>U53220-1|AAC50479.1| 80|Homo sapiens pRb2/p130 protein.
Length = 80
Score = 30.3 bits (65), Expect = 7.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 346 QTSPPADEPPAVGAADEQLRAETEAND-SDAAES 444
Q+ PP PPA A+DE+ + EA D + +AES
Sbjct: 7 QSPPPPPPPPAAAASDEEEEDDGEAEDAAPSAES 40
>AK223222-1|BAD96942.1| 499|Homo sapiens protein phosphatase 5,
catalytic subunit variant protein.
Length = 499
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 355 PPADEPPAVGAADEQLRAETEAND 426
PP DEPPA GA +T+AND
Sbjct: 14 PPRDEPPADGALRRAEELKTQAND 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.309 0.124 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,469,930
Number of Sequences: 237096
Number of extensions: 1715005
Number of successful extensions: 3902
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3902
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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