Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B20
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023845-2|CAA19538.1|  334|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z78544-2|CAB01758.1|  368|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF016684-13|AAB66203.1|  470|Caenorhabditis elegans Hypothetical...    28   8.1  

>AL023845-2|CAA19538.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51B9A.4 protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 1   RPADDSCESAPTPTRFERQPTDRPNRLPPTVYS 99
           R A+ SC+ AP   ++     D PN LPPT  S
Sbjct: 240 RGANYSCDVAPGEVKYINVEIDLPNGLPPTFES 272


>Z78544-2|CAB01758.1|  368|Caenorhabditis elegans Hypothetical
           protein K04G11.3 protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 751 WLSFPKLPCXAVFGKNFAYADW 686
           W+ F  +P    F +  AYADW
Sbjct: 93  WIGFSSVPHHLTFNRKVAYADW 114


>AF016684-13|AAB66203.1|  470|Caenorhabditis elegans Hypothetical
           protein F45C12.3 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 427 SDAAESDGSRTESMAAARERFF-GQIPELTLDGSNSLKHNGSAKDLASVME 576
           SD  E D + T++++AAR+ FF G + E+      ++   G   D     E
Sbjct: 2   SDPLEVDSNTTQNVSAARDNFFQGSVLEVQFSTKYNIIDVGVTSDFPQTAE 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.309    0.124    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,164,105
Number of Sequences: 27780
Number of extensions: 262439
Number of successful extensions: 691
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)