Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B18
(781 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 4.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 7.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 7.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 7.4
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 9.7
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 9.7
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 501 NLFFSLERAQHF*DLMMSSFRIKI 430
+LFFS E+ HF +++M + I+I
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRI 142
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 501 NLFFSLERAQHF*DLMMSSFRIKI 430
+LFFS E+ HF +++M + I+I
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRI 142
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 586 NYLQIENCTNYIFKLYY*VNLESLMYIFKPIF 491
NY N NY KLYY +N + I P++
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 586 NYLQIENCTNYIFKLYY*VNLESLMYIFKPIF 491
NY N NY KLYY +N + I P++
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 586 NYLQIENCTNYIFKLYY*VNLESLMYIFKPIF 491
NY N NY KLYY +N + I P++
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 586 NYLQIENCTNYIFKLYY*VNLESLMYIFKPIF 491
NY N NY KLYY +N + I P++
Sbjct: 94 NYKYNYNNNNYNKKLYYNINYIEQIPIPVPVY 125
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 592 IGNYLQIENCTNYIFKLYY*VN 527
I N N NY KLYY +N
Sbjct: 90 ISNISNYNNNNNYNKKLYYNIN 111
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 592 IGNYLQIENCTNYIFKLYY*VN 527
I N N NY KLYY +N
Sbjct: 90 ISNISNYNNDNNYNKKLYYNIN 111
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 7.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 592 IGNYLQIENCTNYIFKLYY*VN 527
I N N NY KLYY +N
Sbjct: 328 ISNISNYNNNNNYNKKLYYNIN 349
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.4 bits (43), Expect = 9.7
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 523 ESLMYIFKPIF*PRAGPAFLRFNDVFIPY*NNIIVIIWPIKMSYLSIHNYIITLINI 353
+++M I K + +A A + D+F N+I I IK + I YII + I
Sbjct: 27 KTIMRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLI 83
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.4 bits (43), Expect = 9.7
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 523 ESLMYIFKPIF*PRAGPAFLRFNDVFIPY*NNIIVIIWPIKMSYLSIHNYIITLINI 353
+++M I K + +A A + D+F N+I I IK + I YII + I
Sbjct: 10 KTIMRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLI 66
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,413
Number of Sequences: 438
Number of extensions: 4899
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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