Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B11
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 330 5e-91
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 330 5e-91
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 330 5e-91
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 2.9
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 3.8
U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw (imit... 28 6.6
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 6.6
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 330 bits (812), Expect = 5e-91
Identities = 153/201 (76%), Positives = 173/201 (86%)
Frame = +2
Query: 185 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 364
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 365 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 544
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 545 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 724
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 725 SVTKSKFDNLYGCRESLLDGI 787
SVTKSKFDNLYG RESL DGI
Sbjct: 185 SVTKSKFDNLYGIRESLPDGI 205
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 330 bits (812), Expect = 5e-91
Identities = 153/201 (76%), Positives = 173/201 (86%)
Frame = +2
Query: 185 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 364
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 365 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 544
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 545 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 724
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 725 SVTKSKFDNLYGCRESLLDGI 787
SVTKSKFDNLYG RESL DGI
Sbjct: 185 SVTKSKFDNLYGIRESLPDGI 205
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 330 bits (812), Expect = 5e-91
Identities = 153/201 (76%), Positives = 173/201 (86%)
Frame = +2
Query: 185 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 364
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 365 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 544
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 545 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 724
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 725 SVTKSKFDNLYGCRESLLDGI 787
SVTKSKFDNLYG RESL DGI
Sbjct: 185 SVTKSKFDNLYGIRESLPDGI 205
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 448 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 290
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 608 PDLLKDVKGITEETTTGVHNL 670
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
>U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw
(imitation swi) homologprotein 1 protein.
Length = 1009
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +2
Query: 65 RERVLQYQVPIYFR-YFNKNNLKRKQ----QVNLP*VYQTLYYKMKPPYKIADEKLAEWG 229
RER YQV +Y++ N KQ + LP V+ +Y + +++ D+++ +
Sbjct: 690 RERKANYQVDLYYKEAMRAGNPTEKQSKAPRPKLPQVFDFQFYPRR-LFELLDKEIYHYR 748
Query: 230 RKEIMLAE--KEMPGLMACRRKYAPAKILKGAR 322
+ +AE K++P A +R+ K++ AR
Sbjct: 749 KTIGYVAERPKDVPPKEAEKRQAEEQKLINNAR 781
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 674 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 775
+M+ LLK+P+I + SV F+N +G SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,761,735
Number of Sequences: 27780
Number of extensions: 383787
Number of successful extensions: 872
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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