Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B08
(800 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14919| Best HMM Match : MAM (HMM E-Value=0) 42 8e-04
SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06) 40 0.002
SB_32341| Best HMM Match : Lectin_C (HMM E-Value=0.086) 40 0.003
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19) 33 0.36
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_59211| Best HMM Match : zf-C2H2 (HMM E-Value=4.3) 31 0.82
SB_53066| Best HMM Match : RR_TM4-6 (HMM E-Value=0.68) 31 0.82
SB_56031| Best HMM Match : Lectin_C (HMM E-Value=3.3e-08) 31 1.1
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 31 1.1
SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 31 1.4
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 31 1.4
SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_50578| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_44610| Best HMM Match : PI3Ka (HMM E-Value=6.1e-32) 29 4.4
SB_50577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 7.7
>SB_14919| Best HMM Match : MAM (HMM E-Value=0)
Length = 1332
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +1
Query: 448 SQCRGVEAQRNSTKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARW 627
S + + + + + CPP + R+ +SC FF W+ AL C +SN+
Sbjct: 584 SYIQAISMNKTNLSSNSKCPPGWYRIRNSCLFFQQANFNWESALVRCHGINSNVASFQYK 643
Query: 628 ED--------KNLRNYLNKKSIKKYSRW 687
+D ++L+ Y +K + RW
Sbjct: 644 KDLDQVYNILRDLKTYAMLVGLKSFPRW 671
>SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06)
Length = 583
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/90 (27%), Positives = 38/90 (42%)
Frame = +1
Query: 460 GVEAQRNSTKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKN 639
G E +T + Y C + CY +S E TW + C D+D++L + E+
Sbjct: 80 GDEVVTATTYLRYKCKQGWYYYNGKCYHYSSFEETWTQGQRYCLDQDADLAIINDREENE 139
Query: 640 LRNYLNKKSIKKYSRWIGGIYDSGDKEWKW 729
+ K K S +IG G+ WKW
Sbjct: 140 FIRTIAK--CKGGSGFIG--LKGGNGNWKW 165
>SB_32341| Best HMM Match : Lectin_C (HMM E-Value=0.086)
Length = 407
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYS 681
CP F+R SC+F T TW+ A+ C + ++L E + L +K+ S
Sbjct: 97 CPADFVRNERSCFFHQQTPLTWENAIAQCAQKGASLASVQTKEQNTFVSGLIVVCVKESS 156
Query: 682 R-WIGGIY 702
W G I+
Sbjct: 157 NPWKGLIF 164
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 37.5 bits (83), Expect = 0.013
Identities = 24/98 (24%), Positives = 44/98 (44%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYS 681
C + + G SCY FS + TW A C L ++++ +Y+ K++ K +
Sbjct: 122 CDAGWSQYGASCYKFSTSSKTWLIAQQDCHQSGGYLVKVDNSDEQHFLSYM-MKTVMKQA 180
Query: 682 RWIGGIYDSGDKEWKWGGELRKMHYQSFSKMKKMSPXE 795
WIG + + + W G+ K+ Q++S P +
Sbjct: 181 AWIGLNDRAIEGTYVWEGDNTKLG-QNYSHWYSGEPND 217
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNL-TVPARWEDKNLRNYLNKKSIKKY 678
C + G CY F+ + +W A C+ +L ++ + E ++ + + +++Y
Sbjct: 939 CKTGWKEFGQFCYQFNMEKKSWSAARQQCQANGGDLVSIQSPVEQAHITLEVGQFGVREY 998
Query: 679 SRWIGGIYDSGDKEWKW 729
+ WIG +S + W+W
Sbjct: 999 A-WIGLHDESVESAWEW 1014
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 499 VCPPSFIRLGHSCYFFSDTEA---TWQKALFACK 591
+CP +++ SCY F+ +A TW+KA C+
Sbjct: 257 LCPVNWVPYKDSCYHFNTHQAQLVTWEKAYNVCQ 290
>SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +1
Query: 493 SYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIK 672
S CP ++RL SCY T W A AC +L ++ L++K
Sbjct: 2 SLQCPAGWVRLNRSCYKADQTIMNWADARTACGKLGGDLVKITSEQENTFVYELSRKQAP 61
Query: 673 KYSR-WIG 693
+R WIG
Sbjct: 62 SRNRMWIG 69
>SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSN-LTVPARWEDKNLRNYLNKKSIKKY 678
CP + CY + W+ A+ C+++ + LTV E + +R ++ +K++
Sbjct: 254 CPQGWFEAHKVCYGLYHEKMYWRDAMTLCREQGAGLLTVRDANEMEVIRKHIKEKNL--- 310
Query: 679 SRWIGGIYDSGDKEWKWGGELRKMHYQSF 765
W+G Y + + W R +H+ S+
Sbjct: 311 FFWLGARYSHVNGSFLWSDGTR-LHFHSW 338
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 499 VCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNL-TVPARWEDKNLRNYLNKKSIKK 675
VC + G CY F+ + WQ A C++R L ++ + E ++ + +
Sbjct: 1514 VCRTGWKEYGQYCYQFNSDKRNWQSARLMCQNRGGELVSILSPVEQAHITLEVGFFGLST 1573
Query: 676 YSRWIGGIYDSGDKEWKW 729
++ WIG + + W+W
Sbjct: 1574 FA-WIGFHDKTIESAWEW 1590
>SB_59678| Best HMM Match : Lectin_C (HMM E-Value=3.3e-19)
Length = 951
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNL 609
CP ++ + SCY F T+ TW A C +S L
Sbjct: 121 CPRGYVEIRGSCYKFHMTKDTWINAFHECTRENSTL 156
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 532 SCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYS-RWIGGIYDS 708
SCY FS +W + CK R+ +L E+ + N + +S W G+ +
Sbjct: 359 SCYIFSSEGTSWTENREKCKSRNGDLVSMETEEEWSFINKKIQSLSNAFSDEWHIGLKQN 418
Query: 709 GDKEWKW--GGELRKMHYQ 759
G+ W W G L H+Q
Sbjct: 419 GN-SWNWVNGKPLAIDHWQ 436
>SB_49294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 31.9 bits (69), Expect = 0.62
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 493 SYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPAR-WEDKNLRNYLNKKSI 669
S C S+ CYF S E W A +C+ R S L + E++ +R+ + S
Sbjct: 56 SSTCDSSWHYFDGKCYFLSTVEEPWTAAERSCRVRGSTLVIVNNLMENEFIRSLMPSGS- 114
Query: 670 KKYSRWIGGIYDSGDKEWKW 729
WIG + ++W W
Sbjct: 115 ---EVWIGLRWQY--RQWSW 129
>SB_59211| Best HMM Match : zf-C2H2 (HMM E-Value=4.3)
Length = 151
Score = 31.5 bits (68), Expect = 0.82
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -3
Query: 630 LPTSWHCKIAISILAGEERFLPRGFSITEEIA-AVSEPDKRRRTHVRHLCAI---SLRLH 463
LPTS H ++ L ++ + RG + T E A A EP K RRT V +C + +LR H
Sbjct: 67 LPTSAHLRLKGQNLMEKKGRMLRGDATTREKALAQKEPPKHRRTAVCPICHVPNMNLRRH 126
>SB_53066| Best HMM Match : RR_TM4-6 (HMM E-Value=0.68)
Length = 411
Score = 31.5 bits (68), Expect = 0.82
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -3
Query: 630 LPTSWHCKIAISILAGEERFLPRGFSITEEIA-AVSEPDKRRRTHVRHLCAI---SLRLH 463
LPTS H ++ L ++ + RG + T E A A EP K RRT V +C + +LR H
Sbjct: 148 LPTSAHLRLKGQNLMEKKGRMLRGDATTREKALAQKEPPKHRRTAVCPICHVPNMNLRRH 207
>SB_56031| Best HMM Match : Lectin_C (HMM E-Value=3.3e-08)
Length = 129
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPAR-WEDKNLRNYLNKKSIKKY 678
C S+ CYF S E W A +C+ R S L + E++ +R+ + S
Sbjct: 2 CDSSWHYFDGKCYFLSTVEEPWTAAERSCRVRGSTLVIVNNLMENEFIRSLMPSGS---- 57
Query: 679 SRWIGGIYDSGDKEWKW 729
WIG + ++W W
Sbjct: 58 EVWIGLRWQY--RQWSW 72
>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 577
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 502 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNL-TVPARWEDK-NLRNYLN 657
CP + + G SCY S + W +A CK +L ++ + +E LRN +N
Sbjct: 156 CPRFYSKYGDSCYRMSYIKLPWSEAREVCKKEGGDLVSIHSAFEQAFLLRNMIN 209
>SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 1213
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 523 LGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKN--LRNYLNKKSIKKYSRWIGG 696
+G C++ + A W A+ C D + + ED N L L K I +
Sbjct: 639 VGLVCFYIRNVAANWWNAVKGCLDLGAEI-ASVNTEDTNNILTAILKAKGIGTAYIGLND 697
Query: 697 IYDSGDKEWKWGGELRKMHYQSFS 768
I + G WK GG++ YQ+ +
Sbjct: 698 IENEGTVTWK-GGQIVDNGYQNIA 720
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 535 CYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIKKYSRWIGGIYDSGD 714
CY F + + +W +A AC+ D L +++ + + + K+ WIG + +
Sbjct: 1475 CYKFVEDKKSWDEASSACQLDDGRLASILSDDEQTMISQVYSKA----DMWIGYNDKNSE 1530
Query: 715 KEWKWGGEL 741
+W W ++
Sbjct: 1531 GDWVWSDQM 1539
>SB_25470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 544 FSDTEATWQKALFACKDRDSNLTVPARWED---KNLRNYLNKKSIKKYSRWIGGIYDSGD 714
FS + W L K + + + A+W++ KN R +LN + + +S++I + D
Sbjct: 307 FSGKQILWADLLARQKTKGTIIRSRAKWQEMGEKNTRYFLNLERRQHHSKYITKLNDDKS 366
Query: 715 KE 720
KE
Sbjct: 367 KE 368
>SB_50578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 774 HF*EGLVVHLPKLAAPFPFLIAGV 703
HF E +VH+P LA F ++IAG+
Sbjct: 152 HFDEMFLVHIPFLAVGFSYIIAGL 175
>SB_44610| Best HMM Match : PI3Ka (HMM E-Value=6.1e-32)
Length = 773
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = -3
Query: 723 PFLIAGVVYSSDPTTIFLDRFFVKVVSKILILPTSWHCKIAISILAGEERFLPRGFSITE 544
P+L+ D + R ++ SK L + SW CK+ ++L +++F+ + +
Sbjct: 434 PYLLVECKEDKDSKVANMYRNIMRKFSKAL-MKGSWECKVRRNMLGKQQQFIDHIVRLMK 492
Query: 543 EIAAVSEPDKRR 508
E++ S R+
Sbjct: 493 EVSQFSGNRSRK 504
>SB_50577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 774 HF*EGLVVHLPKLAAPFPFLIAGV 703
HF E ++H+P LA F ++IAG+
Sbjct: 153 HFDEMFLIHIPFLAVGFSYVIAGL 176
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 58 RPNAASRAQDSDA*TRTESRTYRDTLETNNQISNGFLFH 174
+PN+ R ++SD+ R +T D E+N +I+ L H
Sbjct: 536 KPNSDERVKESDSELRNRKKTDSDGKESNGEITAKDLSH 574
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,740,073
Number of Sequences: 59808
Number of extensions: 505593
Number of successful extensions: 1344
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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