Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B07
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 32 0.10
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 29 0.72
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 27 3.8
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 26 6.7
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 26 6.7
SPAC4F10.12 |fta1|sma1|Sim4 and Mal2 associated |Schizosaccharom... 25 8.8
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 25 8.8
SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 8.8
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 25 8.8
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 25 8.8
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 31.9 bits (69), Expect = 0.10
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = -2
Query: 454 ITRNPSNTIQTKVKIYVMIIKTAHDILPP-----TRALHAR-*TFWRVAPVVKQPRQSNI 293
+ P N I T V++Y I+KT I PP ++ L AR T R V+Q QS +
Sbjct: 66 VREGPVNDISTIVQLYEEIVKTGFFINPPPFESYSQTLVARITTLGRPKLQVQQEAQSEV 125
Query: 292 NPSAAMHALPTMNIICRASIQINRKWNTSSN 200
A+ + ++ + + + N NT N
Sbjct: 126 YQRASTNTQQQVSNVSHGNFKPNSSVNTEPN 156
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 29.1 bits (62), Expect = 0.72
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Frame = +2
Query: 296 VTLSRLFDYRCNSPESLSGVESSGRWENIVCRFYDHNIYFDLCL-------DSVARISS- 451
++ S+ F+Y+ N+ S S V S + E +V + + N FDL + D V SS
Sbjct: 355 LSASKEFNYKLNALISWSNVMESIQVETLVLQKWVGNDEFDLTMRTPQFNYDGVENTSSF 414
Query: 452 NNNIFVHNILEIMFKTRKYCIINLYRFHSIRLHVSFNGEARRHENMRTTQNK 607
IF + L+ F+ R +N H + +S N +A + T ++K
Sbjct: 415 VERIFRQSGLQRTFEQRTLTTLNRI-IHQAKQTISENAQAFEEMKLPTYEDK 465
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 480 WKLCSKP-ENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKI 605
WKLC V S +F +DF PS++ Q+ M P I
Sbjct: 188 WKLCGFSFSQSVESARYEFNDYDFGIPSSL-QQSMDFLAPEYI 229
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 188 LHPYVRRSIPLSIDLD 235
+HPY + S P+S DLD
Sbjct: 119 IHPYSKTSFPVSYDLD 134
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 463 FCSQYSGNYVQNQKILYHQLV*ISLNST 546
FC+Q S N Q +L+ L LNST
Sbjct: 325 FCNQLSNNLAYQQNLLFTSLNVSDLNST 352
>SPAC4F10.12 |fta1|sma1|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 712 KHIK*CTKLNMTKIHDTIARININSAFST 626
+HIK CT L++T +++++N + A T
Sbjct: 222 EHIKRCTSLDLTNSVFSLSKVNTDCAILT 250
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 604 ILCGSHIFMSSCFTVEGNMKSN*VKSIQVDDTIFSGFE 491
I G H C+++ N S+ + I TIF G E
Sbjct: 354 IFSGGHDGTIRCWSLPANQTSDSISKILTGSTIFQGHE 391
>SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 642 FMFILAMVSCILVIL-SLVHYLMCLSANYAH 731
F+ I+A+ + + V L L H+LM L+ NY++
Sbjct: 130 FILIIALDALLTVSLFGLFHHLMFLTTNYSY 160
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 80 VSSLSNTGATCNPYRYNNVLSRRGCVLWDHVPWICTLHPYVRRSIPLSIDLD 235
+ SL + A+ N Y Y NV S G V+ W+ +L Y + L+ +L+
Sbjct: 296 LESLRHYTASLNEYYYQNVYSANGMVM---SRWVDSLSAYFPGLLVLAGELE 344
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 73 PIILLILIYF*NQNFWSEDTQLNT 2
P+I++IL F + WS+ T +NT
Sbjct: 270 PLIVVILFAFLSNFSWSDSTSVNT 293
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,333,766
Number of Sequences: 5004
Number of extensions: 73579
Number of successful extensions: 222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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