BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_B07
(755 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF253528-1|AAF71284.1| 248|Drosophila melanogaster proteolipid ... 285 4e-77
BT010069-1|AAQ22538.1| 314|Drosophila melanogaster LD13050p pro... 283 2e-76
AF253528-2|AAF71285.1| 314|Drosophila melanogaster proteolipid ... 283 2e-76
AE014296-3552|AAN12170.1| 314|Drosophila melanogaster CG7540-PB... 283 2e-76
AE014296-3551|AAF51736.1| 314|Drosophila melanogaster CG7540-PA... 283 2e-76
>AF253528-1|AAF71284.1| 248|Drosophila melanogaster proteolipid
protein M6-1 protein.
Length = 248
Score = 285 bits (699), Expect = 4e-77
Identities = 132/228 (57%), Positives = 160/228 (70%)
Frame = +3
Query: 69 MGDACQACLTRVPHATLIATIMCCLGVGVFCGTMYRGSALSILMFDEVFHFRLIWIEALQ 248
MG+ CQ+C+ R+P+ATLIAT+MC LGVG+FC TMYRG++L+++M D+VFH RLIWIEA+Q
Sbjct: 1 MGECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHLRLIWIEAVQ 60
Query: 249 MIFIVGSAXXXXXXXXXXXXXXXXXXXXRQKVYRAWRARVGGRISCAVFMIITYILTFVW 428
MIF++ A R KVYRAWR+RVGGRISCAV M ITY+L FVW
Sbjct: 61 MIFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVLMGITYLLNFVW 120
Query: 429 IXXXXXXXXXXXXXXXXWKLCSKPENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIK 608
W +C+ E+ S +CID TQF FMFP K EDMK+CE ++IK
Sbjct: 121 SLILCFLVVVTFIYTMFWNMCTSVEH--SQSCIDLTQFHFMFPPNTKLEDMKVCEKYEIK 178
Query: 609 LFCKDYVEKAEFMFILAMVSCILVILSLVHYLMCLSANYAHIRDHEKF 752
FCKD VE AE MFILA +S +LV+LSLVHYLMCLSANYAHIRDHEKF
Sbjct: 179 AFCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKF 226
>BT010069-1|AAQ22538.1| 314|Drosophila melanogaster LD13050p
protein.
Length = 314
Score = 283 bits (694), Expect = 2e-76
Identities = 131/227 (57%), Positives = 159/227 (70%)
Frame = +3
Query: 72 GDACQACLTRVPHATLIATIMCCLGVGVFCGTMYRGSALSILMFDEVFHFRLIWIEALQM 251
G+ CQ+C+ R+P+ATLIAT+MC LGVG+FC TMYRG++L+++M D+VFH RLIWIEA+QM
Sbjct: 68 GECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHLRLIWIEAVQM 127
Query: 252 IFIVGSAXXXXXXXXXXXXXXXXXXXXRQKVYRAWRARVGGRISCAVFMIITYILTFVWI 431
IF++ A R KVYRAWR+RVGGRISCAV M ITY+L FVW
Sbjct: 128 IFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVLMGITYLLNFVWS 187
Query: 432 XXXXXXXXXXXXXXXXWKLCSKPENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKL 611
W +C+ E+ S +CID TQF FMFP K EDMK+CE ++IK
Sbjct: 188 LILCFLVVVTFIYTMFWNMCTSVEH--SQSCIDLTQFHFMFPPNTKLEDMKVCEKYEIKA 245
Query: 612 FCKDYVEKAEFMFILAMVSCILVILSLVHYLMCLSANYAHIRDHEKF 752
FCKD VE AE MFILA +S +LV+LSLVHYLMCLSANYAHIRDHEKF
Sbjct: 246 FCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKF 292
>AF253528-2|AAF71285.1| 314|Drosophila melanogaster proteolipid
protein M6-2 protein.
Length = 314
Score = 283 bits (694), Expect = 2e-76
Identities = 131/227 (57%), Positives = 159/227 (70%)
Frame = +3
Query: 72 GDACQACLTRVPHATLIATIMCCLGVGVFCGTMYRGSALSILMFDEVFHFRLIWIEALQM 251
G+ CQ+C+ R+P+ATLIAT+MC LGVG+FC TMYRG++L+++M D+VFH RLIWIEA+QM
Sbjct: 68 GECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHLRLIWIEAVQM 127
Query: 252 IFIVGSAXXXXXXXXXXXXXXXXXXXXRQKVYRAWRARVGGRISCAVFMIITYILTFVWI 431
IF++ A R KVYRAWR+RVGGRISCAV M ITY+L FVW
Sbjct: 128 IFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVLMGITYLLNFVWS 187
Query: 432 XXXXXXXXXXXXXXXXWKLCSKPENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKL 611
W +C+ E+ S +CID TQF FMFP K EDMK+CE ++IK
Sbjct: 188 LILCFLVVVTFIYTMFWNMCTSVEH--SQSCIDLTQFHFMFPPNTKLEDMKVCEKYEIKA 245
Query: 612 FCKDYVEKAEFMFILAMVSCILVILSLVHYLMCLSANYAHIRDHEKF 752
FCKD VE AE MFILA +S +LV+LSLVHYLMCLSANYAHIRDHEKF
Sbjct: 246 FCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKF 292
>AE014296-3552|AAN12170.1| 314|Drosophila melanogaster CG7540-PB,
isoform B protein.
Length = 314
Score = 283 bits (694), Expect = 2e-76
Identities = 131/227 (57%), Positives = 159/227 (70%)
Frame = +3
Query: 72 GDACQACLTRVPHATLIATIMCCLGVGVFCGTMYRGSALSILMFDEVFHFRLIWIEALQM 251
G+ CQ+C+ R+P+ATLIAT+MC LGVG+FC TMYRG++L+++M D+VFH RLIWIEA+QM
Sbjct: 68 GECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHLRLIWIEAVQM 127
Query: 252 IFIVGSAXXXXXXXXXXXXXXXXXXXXRQKVYRAWRARVGGRISCAVFMIITYILTFVWI 431
IF++ A R KVYRAWR+RVGGRISCAV M ITY+L FVW
Sbjct: 128 IFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVLMGITYLLNFVWS 187
Query: 432 XXXXXXXXXXXXXXXXWKLCSKPENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKL 611
W +C+ E+ S +CID TQF FMFP K EDMK+CE ++IK
Sbjct: 188 LILCFLVVVTFIYTMFWNMCTSVEH--SQSCIDLTQFHFMFPPNTKLEDMKVCEKYEIKA 245
Query: 612 FCKDYVEKAEFMFILAMVSCILVILSLVHYLMCLSANYAHIRDHEKF 752
FCKD VE AE MFILA +S +LV+LSLVHYLMCLSANYAHIRDHEKF
Sbjct: 246 FCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKF 292
>AE014296-3551|AAF51736.1| 314|Drosophila melanogaster CG7540-PA,
isoform A protein.
Length = 314
Score = 283 bits (694), Expect = 2e-76
Identities = 131/227 (57%), Positives = 159/227 (70%)
Frame = +3
Query: 72 GDACQACLTRVPHATLIATIMCCLGVGVFCGTMYRGSALSILMFDEVFHFRLIWIEALQM 251
G+ CQ+C+ R+P+ATLIAT+MC LGVG+FC TMYRG++L+++M D+VFH RLIWIEA+QM
Sbjct: 68 GECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHLRLIWIEAVQM 127
Query: 252 IFIVGSAXXXXXXXXXXXXXXXXXXXXRQKVYRAWRARVGGRISCAVFMIITYILTFVWI 431
IF++ A R KVYRAWR+RVGGRISCAV M ITY+L FVW
Sbjct: 128 IFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVLMGITYLLNFVWS 187
Query: 432 XXXXXXXXXXXXXXXXWKLCSKPENIVSSTCIDFTQFDFMFPSTVKQEDMKICEPHKIKL 611
W +C+ E+ S +CID TQF FMFP K EDMK+CE ++IK
Sbjct: 188 LILCFLVVVTFIYTMFWNMCTSVEH--SQSCIDLTQFHFMFPPNTKLEDMKVCEKYEIKA 245
Query: 612 FCKDYVEKAEFMFILAMVSCILVILSLVHYLMCLSANYAHIRDHEKF 752
FCKD VE AE MFILA +S +LV+LSLVHYLMCLSANYAHIRDHEKF
Sbjct: 246 FCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKF 292
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,372,499
Number of Sequences: 53049
Number of extensions: 801001
Number of successful extensions: 1964
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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