Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B06
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   2.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 198  REKVINPEDSEHNDPRQRKVDFISST 275
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 198  REKVINPEDSEHNDPRQRKVDFISST 275
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 198  REKVINPEDSEHNDPRQRKVDFISST 275
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 198  REKVINPEDSEHNDPRQRKVDFISST 275
            R+ ++NP   E  D R+ +V+F+SST
Sbjct: 1206 RDDLVNPYWIEDPDVRKGEVEFLSST 1231


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 327 FTL*VHLTIDVIDIDNVWC 271
           F +  HL   VI + N+WC
Sbjct: 117 FVIVAHLLFLVIFVLNIWC 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,688
Number of Sequences: 336
Number of extensions: 1605
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)