Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B06
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z81589-2|CAB04724.1|  728|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 121 PVAPPMPEAIRRAIDYILAHPPKTETVKK 207
           P+ PP+PE I   +  +LA  P   +V K
Sbjct: 57  PIPPPLPEPIPELVQILLAAEPNKPSVPK 85


>Z81589-2|CAB04724.1|  728|Caenorhabditis elegans Hypothetical
           protein T08G5.2 protein.
          Length = 728

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 70  FTYTADENGYQPQSELLPVAPPMPEAIRRAI 162
           F  +AD+ G + ++E++PV    PEA+ + I
Sbjct: 162 FGLSADKGGTKHRAEMVPVRYMAPEAVEKMI 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,062,697
Number of Sequences: 27780
Number of extensions: 154610
Number of successful extensions: 532
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)