Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B03
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    25   0.69 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   1.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.7  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 577 LQNLSFYLFHGQCEVQTFLLQKDGFYLVRYLALHINPALF 458
           L N +F +   +   +TF ++KD   ++   A+H +P  F
Sbjct: 351 LCNKNFVIEASKPHERTFTVEKDTMVMISMFAIHRDPQYF 390


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 397 RVMQLYKIITKTSEDNHEYERIKQDLYEALSILPNKTHPFVKGKF 531
           R + LY    +  +   E E +++ +Y  L      THP   G+F
Sbjct: 317 RAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRF 361


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 616 LNLMRIEKLGHTCGHKSYYFF 678
           LN +RI + G    HKS YF+
Sbjct: 37  LNTLRIGRKGELKQHKSDYFY 57


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 616 LNLMRIEKLGHTCGHKSYYFF 678
           LN +RI + G    HKS YF+
Sbjct: 37  LNTLRIGRKGELKQHKSDYFY 57


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 643  GHTCGHKSYYFFGELAELEEAIIKYTVKKLL 735
            G+T  +K  +   E  ++   + KYT++KLL
Sbjct: 1428 GYTIHYKPEFGDWETVQIGPTVEKYTLEKLL 1458


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,478
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)