Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_B03
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171     30   2.4  
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756...    29   3.2  
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726...    29   5.5  
01_05_0645 - 23899579-23904483                                         28   9.7  

>06_03_0599 + 22632625-22633030,22634733-22636724,22636819-22637171
          Length = 916

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 277 FKRFFSQIYPNYNLQYYCNPKNHEEIKQ 360
           FK      +PN NL  + +PK+HE I Q
Sbjct: 686 FKAIVFPYFPNGNLDMWLHPKSHEHISQ 713


>11_06_0371 +
           22774245-22774413,22774504-22774670,22775538-22775631,
           22775723-22775871,22775950-22776042,22776167-22776235,
           22776236-22776415,22776465-22776518,22776739-22776905,
           22777180-22777314,22777386-22777479,22777567-22777848
          Length = 550

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 655 GHKSYYFFGELAELEEAIIKYTVKKLLDDGFQLISVPDILAXNV 786
           G K YY   E   LE A++ + + ++   GF  +  P+I+  +V
Sbjct: 250 GSKFYYLKNEAVLLEMALVNWAITEVSKKGFTPLITPEIVRSSV 293


>01_05_0344 +
           21172101-21172233,21172332-21172402,21172492-21172653,
           21172995-21173100,21174242-21174439,21174565-21174631,
           21174868-21175051,21175145-21175324,21175408-21175587,
           21176472-21176627,21177487-21178067,21178535-21178640,
           21179152-21179331,21179620-21179892
          Length = 858

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +1

Query: 601 EITRLLNLMRIEKLGHTCGHKSYYFFGELAELEEAIIKYTVKKLLDDGFQLISVP 765
           ++ ++L+++ +EK     G + YY   E   L  A+I + +  L   GF+ +  P
Sbjct: 145 DLCKMLDIVALEKGADVAGGRGYYLKDEGVLLNLALINFGLAFLRKRGFKPMQTP 199


>01_05_0645 - 23899579-23904483
          Length = 1634

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
 Frame = +1

Query: 313  NLQYYCN--PKNHEEIKQNIKIRKGVGDIDRVMQLYKIITKTSEDNHEYE---RIKQDLY 477
            NLQ + N    NHEEI     I  G+  ++ +      I ++   N   +   R+    Y
Sbjct: 1427 NLQRFRNLPTYNHEEISLQTIIDHGL--VNSIYATLDQILQSDLGNAVKDICRRLGHGRY 1484

Query: 478  EAL-SILPNKTHPFVKGKFEPHIVHEINKKKDFGEYKPFEFSEITRLLNLMRIEKLGHTC 654
              + S +P K  P V+     H ++ +N++ +F E  P + S+          E      
Sbjct: 1485 RIIFSSIPPKFTPPVRPAI--HYIYIMNRQFNFQEDGPSKLSDEEE-------EIYTTIA 1535

Query: 655  GHKSYYFFGELAELEEAI 708
             H+++  F E AE+EEAI
Sbjct: 1536 NHENWRLFSEAAEIEEAI 1553


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,406,564
Number of Sequences: 37544
Number of extensions: 263435
Number of successful extensions: 666
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)