Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A22
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 182 4e-47
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 171 9e-44
SPBC1711.04 |||methylenetetrahydrofolate reductase |Schizosaccha... 57 3e-09
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 0.72
SPAC14C4.08 |mug5||meiotically upregulated gene Mug5|Schizosacch... 27 2.9
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 27 3.8
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 26 5.1
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 26 6.7
SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|ch... 26 6.7
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 26 6.7
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 26 6.7
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 25 8.9
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 182 bits (444), Expect = 4e-47
Identities = 89/195 (45%), Positives = 131/195 (67%), Gaps = 1/195 (0%)
Frame = +3
Query: 174 AVQESIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHI 353
++ + +LR+Q++ ++S F L I+QVGGREDSNVY+RMK +AA + GI+ EH+
Sbjct: 9 SLARKVREELREQISSIKSVDPYFNVSLKIIQVGGREDSNVYVRMKTRAANEAGISCEHV 68
Query: 354 RLPRDITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTI 533
P DITE +LL I NE P+VHGIIVQ+PL + I+ +T+AV+P+KDVDG
Sbjct: 69 NFPEDITEYDLLLAIKGFNEDPTVHGIIVQLPLPAH--INEQIITEAVAPEKDVDGFCET 126
Query: 534 NEGRVAVGDLSG-FIPCTPAGCVELIKKTGVTIAGKNVVXLGRSRIVGTPVSELLKWEHA 710
N G++ + F CTP G + ++K G+ + GK+ V +GRS IVG P+S LL+ +A
Sbjct: 127 NLGKLTKREGQPLFTACTPKGIMCILKHYGINVQGKHAVVIGRSNIVGRPMSILLEKANA 186
Query: 711 TVTVCHSKTXNLSEI 755
TVT+CHSKT ++++I
Sbjct: 187 TVTLCHSKTESIADI 201
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 171 bits (416), Expect = 9e-44
Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = +3
Query: 141 TSMWKNSEELEAVQESIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKA 320
TS N + + ++ + ++V L++K F+P LAIVQVG REDSNVY+RMK KA
Sbjct: 29 TSSSANILNGKLLARKLQRSVAEEVQALKAKDRNFKPALAIVQVGKREDSNVYVRMKEKA 88
Query: 321 AEKIGIAAEHIRLPRDITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVS 500
A +GI ++ P I LL ++ LN+ +VHG++VQ+PL ++ VT++++
Sbjct: 89 ARLVGIDFKYCPFPETIQMPALLHELKKLNDDHTVHGVLVQLPLPKH--LNERTVTESIT 146
Query: 501 PDKDVDGLNTINEGRVAVGDLSGF-IPCTPAGCVELIKKTGVTIAGKNVVXLGRSRIVGT 677
P KDVDG N G +A D + PCTP G +EL+K +++AG N V LGRS IVG
Sbjct: 147 PPKDVDGFGAFNIGLLAKNDATPIHYPCTPKGIMELLKDNKISVAGLNAVVLGRSDIVGN 206
Query: 678 PVSELLKWEHATVTVCHSKTXNL 746
P+S LL+ ++ATVTVCHSKT +L
Sbjct: 207 PISYLLRKDNATVTVCHSKTKDL 229
>SPBC1711.04 |||methylenetetrahydrofolate reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 320
Score = 56.8 bits (131), Expect = 3e-09
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 17/197 (8%)
Frame = +3
Query: 177 VQESIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIR 356
V E+ L+Q V F P+L + +Y K +IG E
Sbjct: 21 VAETFVEQLKQHVNLFE-----FAPKLVGFLSNSDPAARMYADWTNKTCTEIGFQYELRE 75
Query: 357 LPRDITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGL---- 524
+P+D +L I N PSV+GI++ P+ +D D + + VSPDKDV+GL
Sbjct: 76 VPKD----DLEDAIVEANNDPSVNGIMIYFPVFNDGQ-DQY-LQQVVSPDKDVEGLCHKY 129
Query: 525 --NTINEGRVAVGDLS--GFIPCTPAGCVELIKKTGV---------TIAGKNVVXLGRSR 665
N + R + + +PCTP V++++ GV + GK + + RS
Sbjct: 130 VMNMYHNIRHLDPEKTKKSILPCTPLAIVKILEYLGVYNKIINYGNRLYGKTITIVNRSE 189
Query: 666 IVGTPVSELLKWEHATV 716
IVG P++ LL + A V
Sbjct: 190 IVGRPLAALLANDGAKV 206
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.1 bits (62), Expect = 0.72
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 673 PTMRLRPSXTTFL-PAIVTPVFLISSTHPAGVQGMNPDRSPTATRPSLIVFKPSTS 509
P P+ +TF P++ +P F SST NP +P + P KPST+
Sbjct: 366 PLQNTNPAPSTFPNPSVASPAFPNSSTS-------NPSTAPASASPLASTLKPSTA 414
>SPAC14C4.08 |mug5||meiotically upregulated gene
Mug5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 179
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 237 SGFEPRLAIVQVGGRE-DSNVYIRMKLKAAEKI 332
SGFE R+ I++ E DSN+YIR+K + K+
Sbjct: 11 SGFENRIKILEDLMNEFDSNLYIRLKRECDFKL 43
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 171 EAVQESIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRM--KLKAAEK 329
E ++ S++ D+RQ++ +L + S E I + RE IRM +L++AE+
Sbjct: 30 EEIESSLK-DVRQELQKLNEEQSRLEKNAQIPEYRVRESEAFLIRMQRRLESAEE 83
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 201 LRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHI 353
L + +T+LR+ + P A V G ED N+Y+ + + +H+
Sbjct: 223 LTKLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALHVYKDHV 273
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 375 EIELLAKITSLNESPSVHGIIVQMPLD-SDHAIDAHRVTDAVSPDKDVDGLNTI 533
+I +L I +L E +++ + D ++ A RVT+ V DK+ DG+ T+
Sbjct: 249 KIVVLKHIFTLEELDKTPELLIDLKDDITEEAEKCGRVTNVVLYDKEPDGVVTV 302
>SPCC18.04 |pof6||F-box protein Pof6|Schizosaccharomyces pombe|chr
3|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 6.7
Identities = 22/105 (20%), Positives = 49/105 (46%)
Frame = +3
Query: 69 CKISCSRNRRICFYCCIVIKILRITSMWKNSEELEAVQESIENDLRQQVTRLRSKWSGFE 248
C++ C + +++C Y I +K L + + W + + ES + + ++ SK GF
Sbjct: 53 CRLVCRKFQQLCDYNSIYVKKLLLMNAWDVTLSRKLYYESQDGMSQANMSSNTSK--GFH 110
Query: 249 PRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRDITEIE 383
+ + + DS+ R KL ++ + + + I P D + ++
Sbjct: 111 LQSSDKKYA---DSD---RPKLSSSSLLSLPDQKIPFPVDYSTVQ 149
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 583 VQGMNPDRSPTATRPSLIVFKPSTSLSGETASV 485
V+ N + PT RP L V++ S LS T V
Sbjct: 447 VEDPNAEIGPTGERPKLFVWQNSWGLSTRTIGV 479
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 297 YIRMKLKAAEKIGIAAEHIRLPRDITEIELLAKI 398
YI KL A G+A + I DI E+E+LAKI
Sbjct: 23 YISPKLYIASS-GVAGDGIFSTFDIDELEVLAKI 55
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 111 SKNKFAGSVSNLFYTKMHCRRIRPARFD 28
S NK+ ++S L + +HC+ RFD
Sbjct: 247 SLNKYGENISYLRLSLLHCKEALKTRFD 274
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,942,129
Number of Sequences: 5004
Number of extensions: 57750
Number of successful extensions: 152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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