Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_A21
         (465 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0583 + 34901636-34901721,34901805-34901902,34902029-349021...    28   3.2  
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597...    27   7.4  

>03_06_0583 +
           34901636-34901721,34901805-34901902,34902029-34902167,
           34902262-34902290,34902406-34902502,34902593-34902648,
           34902759-34902866,34902988-34903044,34905585-34905679,
           34905822-34905998,34906086-34906189,34906595-34906664,
           34906774-34906833
          Length = 391

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 34  PPAGFEHRCIASTRMHRTSYP 96
           PP G +H CI + R H TS P
Sbjct: 304 PPTGDQHACIQALRDHWTSIP 324


>03_02_0155 -
           5974118-5974173,5974242-5974314,5974393-5974500,
           5975189-5976914,5977065-5977620,5978008-5978485
          Length = 998

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 6   GRCSLEKLVPACGIRTPVHRFNTNAPDV 89
           G C++  LVP      PVH   TN PD+
Sbjct: 235 GACAVSNLVPLTENNEPVHSIGTN-PDI 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,954,880
Number of Sequences: 37544
Number of extensions: 147823
Number of successful extensions: 265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)