Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A17
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 171 3e-42
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 171 3e-42
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 54 7e-07
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 54 7e-07
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 54 7e-07
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 54 7e-07
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 54 7e-07
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 52 2e-06
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 52 3e-06
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 52 3e-06
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 52 3e-06
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 171 bits (415), Expect = 3e-42
Identities = 78/136 (57%), Positives = 99/136 (72%)
Frame = +2
Query: 350 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 529
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 13 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 72
Query: 530 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGD 709
YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+I E P+ L LNP + D
Sbjct: 73 EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD 132
Query: 710 QLPVVLYESXIDVVNG 757
LPV ++ES ID++NG
Sbjct: 133 -LPVSVFESVIDIING 147
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 171 bits (415), Expect = 3e-42
Identities = 78/136 (57%), Positives = 99/136 (72%)
Frame = +2
Query: 350 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 529
LHPLVI+N+S+HW R+++QEG P V+GALIGKQ+GRNIEVMNSFEL+
Sbjct: 43 LHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDK 102
Query: 530 XYYNMKEEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGD 709
YY KEEQFKQVF +++FLGWYTTG P DI VH+Q+C+I E P+ L LNP + D
Sbjct: 103 EYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD 162
Query: 710 QLPVVLYESXIDVVNG 757
LPV ++ES ID++NG
Sbjct: 163 -LPVSVFESVIDIING 177
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 53.6 bits (123), Expect = 7e-07
Identities = 42/175 (24%), Positives = 72/175 (41%)
Frame = +2
Query: 233 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 412
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 413 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 592
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 593 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGDQLPVVLYESXIDVVNG 757
WY TG +E + +H P+ L ++ + NG ++ + Y S + V G
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPG 225
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 53.6 bits (123), Expect = 7e-07
Identities = 42/175 (24%), Positives = 72/175 (41%)
Frame = +2
Query: 233 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 412
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 413 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 592
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 593 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGDQLPVVLYESXIDVVNG 757
WY TG +E + +H P+ L ++ + NG ++ + Y S + V G
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPG 225
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 53.6 bits (123), Expect = 7e-07
Identities = 42/175 (24%), Positives = 72/175 (41%)
Frame = +2
Query: 233 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 412
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 413 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 592
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 593 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGDQLPVVLYESXIDVVNG 757
WY TG +E + +H P+ L ++ + NG ++ + Y S + V G
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPG 225
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 53.6 bits (123), Expect = 7e-07
Identities = 42/175 (24%), Positives = 72/175 (41%)
Frame = +2
Query: 233 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 412
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 64 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 112
Query: 413 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 592
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 113 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 171
Query: 593 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGDQLPVVLYESXIDVVNG 757
WY TG +E + +H P+ L ++ + NG ++ + Y S + V G
Sbjct: 172 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPG 225
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 53.6 bits (123), Expect = 7e-07
Identities = 42/175 (24%), Positives = 72/175 (41%)
Frame = +2
Query: 233 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 412
AS+ P + P P P P PG LHP+++ ++ + + R EG
Sbjct: 57 ASAQAPAQTPAPALPGPALPGP---------FPGGRVVRLHPVILASIVDSYER--RNEG 105
Query: 413 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 592
+ V+G L+G ++EV N F + + + E K+V + LG
Sbjct: 106 AAR-VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILG 164
Query: 593 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGDQLPVVLYESXIDVVNG 757
WY TG +E + +H P+ L ++ + NG ++ + Y S + V G
Sbjct: 165 WYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPG 218
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 52.0 bits (119), Expect = 2e-06
Identities = 43/175 (24%), Positives = 73/175 (41%)
Frame = +2
Query: 233 ASSGPPIEVPNPTSPAPTTPGSNKXXXXXXXXXXXXXXXLHPLVIMNVSEHWTRLKAQEG 412
AS+ P++ P PT P P PG LHP+++ + + + R +G
Sbjct: 54 ASAQAPVQTPAPTLPGPALPGP---------FPGGRVVRLHPVLLASTVDSYER--RNKG 102
Query: 413 FPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXXXYYNMKEEQFKQVFSDMDFLG 592
+ V+G L+G ++EV N F + ++ NM E K+V + LG
Sbjct: 103 AAR-VIGTLLGTVNKHSVEVTNCFSVSYNESDEVVVDMEFAKNM-YELHKKVSPNELILG 160
Query: 593 WYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGXNGDQLPVVLYESXIDVVNG 757
WY G +E + +H P+ L ++ + NG + + Y S + V G
Sbjct: 161 WYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-HMSIKAYVSTLMGVPG 214
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +2
Query: 350 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 529
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-VKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 530 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH 640
++ E FK+V + +GWY TG + DIA++
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAIN 109
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +2
Query: 350 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 529
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 530 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH 640
++ E FK+V + +GWY TG + DIA++
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAIN 109
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +2
Query: 350 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 529
+HPLV+++V +H+ R+ + G + VVG L+G + + ++V NSF + F
Sbjct: 11 VHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWF 69
Query: 530 XYYNMKEEQ---FKQVFSDMDFLGWYTTGDAPSERDIAVH 640
++ E FK+V + +GWY TG + DIA++
Sbjct: 70 LDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAIN 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,252,465
Number of Sequences: 237096
Number of extensions: 1868896
Number of successful extensions: 5850
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5817
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -