Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A14
(863 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119110-1|AAM50970.1| 441|Drosophila melanogaster RE12054p pro... 52 8e-07
AE013599-233|AAM70833.1| 449|Drosophila melanogaster CG3287-PC,... 52 8e-07
AE013599-232|AAG22207.2| 449|Drosophila melanogaster CG3287-PB,... 52 8e-07
U77645-1|AAB39742.1| 412|Drosophila melanogaster Rca1 protein. 30 4.7
AY058372-1|AAL13601.1| 411|Drosophila melanogaster GH14043p pro... 30 4.7
AE014134-1180|AAF52448.1| 411|Drosophila melanogaster CG10800-P... 30 4.7
AY051906-1|AAK93330.1| 458|Drosophila melanogaster LD39624p pro... 29 6.2
AE013599-3805|AAM68301.1| 458|Drosophila melanogaster CG3209-PB... 29 6.2
AE013599-3804|AAF47157.1| 537|Drosophila melanogaster CG3209-PA... 29 6.2
>AY119110-1|AAM50970.1| 441|Drosophila melanogaster RE12054p
protein.
Length = 441
Score = 52.4 bits (120), Expect = 8e-07
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Frame = +3
Query: 372 ENLAVNELRSRSRSKTPFLRSTCDGENCTEGDDHTH-HKAGRKTPVKSRHTPVKQ---LG 539
EN E R RSRSKTPFLRS+CD ENC + H H RK+ + T +++
Sbjct: 3 ENTYQIETRRRSRSKTPFLRSSCDHENCEHAGEEGHVHHLKRKSAAPNVQTIIEEHIVES 62
Query: 540 PPXXXXXXXXXXXXXXXYSS----PPAHRTRQS-TKNTTDRLVKTSDYSSEESLDRLKGH 704
YSS P A R + S T T L K S ++ +R
Sbjct: 63 SISKKTRAKAFAQLTSDYSSDDMTPDAKRKQNSITATVTSILTKRSGGATSTPRNR---S 119
Query: 705 RKEIFQNEINSQYERVSTSSXRYST 779
+ E QN +NS E+++ S+ S+
Sbjct: 120 QLETTQNTLNSAQEKLNQSNGNLSS 144
>AE013599-233|AAM70833.1| 449|Drosophila melanogaster CG3287-PC,
isoform C protein.
Length = 449
Score = 52.4 bits (120), Expect = 8e-07
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Frame = +3
Query: 372 ENLAVNELRSRSRSKTPFLRSTCDGENCTEGDDHTH-HKAGRKTPVKSRHTPVKQ---LG 539
EN E R RSRSKTPFLRS+CD ENC + H H RK+ + T +++
Sbjct: 3 ENTYQIETRRRSRSKTPFLRSSCDHENCEHAGEEGHVHHLKRKSAAPNVQTIIEEHIVES 62
Query: 540 PPXXXXXXXXXXXXXXXYSS----PPAHRTRQS-TKNTTDRLVKTSDYSSEESLDRLKGH 704
YSS P A R + S T T L K S ++ +R
Sbjct: 63 SISKKTRAKAFAQLTSDYSSDDMTPDAKRKQNSITATVTSILTKRSGGATSTPRNR---S 119
Query: 705 RKEIFQNEINSQYERVSTSSXRYST 779
+ E QN +NS E+++ S+ S+
Sbjct: 120 QLETTQNTLNSAQEKLNQSNGNLSS 144
>AE013599-232|AAG22207.2| 449|Drosophila melanogaster CG3287-PB,
isoform B protein.
Length = 449
Score = 52.4 bits (120), Expect = 8e-07
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Frame = +3
Query: 372 ENLAVNELRSRSRSKTPFLRSTCDGENCTEGDDHTH-HKAGRKTPVKSRHTPVKQ---LG 539
EN E R RSRSKTPFLRS+CD ENC + H H RK+ + T +++
Sbjct: 3 ENTYQIETRRRSRSKTPFLRSSCDHENCEHAGEEGHVHHLKRKSAAPNVQTIIEEHIVES 62
Query: 540 PPXXXXXXXXXXXXXXXYSS----PPAHRTRQS-TKNTTDRLVKTSDYSSEESLDRLKGH 704
YSS P A R + S T T L K S ++ +R
Sbjct: 63 SISKKTRAKAFAQLTSDYSSDDMTPDAKRKQNSITATVTSILTKRSGGATSTPRNR---S 119
Query: 705 RKEIFQNEINSQYERVSTSSXRYST 779
+ E QN +NS E+++ S+ S+
Sbjct: 120 QLETTQNTLNSAQEKLNQSNGNLSS 144
>U77645-1|AAB39742.1| 412|Drosophila melanogaster Rca1 protein.
Length = 412
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 405 SRSKTPFLRSTCDGENCTEGDDHTHHKAGRKTP 503
S ++TPFL +GENC + T G TP
Sbjct: 39 STAETPFLLEDAEGENCRNASNTTTFFRGLNTP 71
>AY058372-1|AAL13601.1| 411|Drosophila melanogaster GH14043p
protein.
Length = 411
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 405 SRSKTPFLRSTCDGENCTEGDDHTHHKAGRKTP 503
S ++TPFL +GENC + T G TP
Sbjct: 39 STAETPFLLEDAEGENCRNASNTTTFFRGLNTP 71
>AE014134-1180|AAF52448.1| 411|Drosophila melanogaster CG10800-PA
protein.
Length = 411
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 405 SRSKTPFLRSTCDGENCTEGDDHTHHKAGRKTP 503
S ++TPFL +GENC + T G TP
Sbjct: 39 STAETPFLLEDAEGENCRNASNTTTFFRGLNTP 71
>AY051906-1|AAK93330.1| 458|Drosophila melanogaster LD39624p
protein.
Length = 458
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 427 KKGVFERDLDRNSLTARFSIISAIEMSVITYH 332
K G F+RDL L F ++S+ +VITYH
Sbjct: 209 KDGPFKRDLVHKVLGMCFGVLSSAISAVITYH 240
>AE013599-3805|AAM68301.1| 458|Drosophila melanogaster CG3209-PB,
isoform B protein.
Length = 458
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 427 KKGVFERDLDRNSLTARFSIISAIEMSVITYH 332
K G F+RDL L F ++S+ +VITYH
Sbjct: 209 KDGPFKRDLVHKVLGMCFGVLSSAISAVITYH 240
>AE013599-3804|AAF47157.1| 537|Drosophila melanogaster CG3209-PA,
isoform A protein.
Length = 537
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 427 KKGVFERDLDRNSLTARFSIISAIEMSVITYH 332
K G F+RDL L F ++S+ +VITYH
Sbjct: 288 KDGPFKRDLVHKVLGMCFGVLSSAISAVITYH 319
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,324,203
Number of Sequences: 53049
Number of extensions: 686797
Number of successful extensions: 1416
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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