Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_A14
         (863 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006810-6|AAF59628.1|  426|Caenorhabditis elegans Cytochrome p4...    29   4.3  
U97000-10|AAC47997.1|  530|Caenorhabditis elegans Hypothetical p...    28   9.9  

>AC006810-6|AAF59628.1|  426|Caenorhabditis elegans Cytochrome p450
           family protein33C12 protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 663 DYSSEESLDRLKGHRKEIFQNEINSQYERVSTSSXRYSTF 782
           D+ SEESLD  + + KE  + E   ++E  ST     + F
Sbjct: 257 DFDSEESLDYAEAYLKEQRKQEAQGEFELFSTKQLSNTCF 296


>U97000-10|AAC47997.1|  530|Caenorhabditis elegans Hypothetical
           protein F21F8.11 protein.
          Length = 530

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -1

Query: 746 FILTIDLVLKYFLPVTLKSVQAFFGRII*GFYQTVGCILSRLPS 615
           F+  ++    ++  V L SV AFFG  I GFY +   +LS  PS
Sbjct: 399 FLRYMNCATPFYALVLLSSVSAFFGLSISGFYTS---LLSIAPS 439


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,337,837
Number of Sequences: 27780
Number of extensions: 365882
Number of successful extensions: 816
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)