Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A12
(834 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 110 2e-24
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 79 3e-15
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 62 7e-10
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 59 4e-09
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 58 7e-09
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 58 9e-09
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 58 1e-08
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 58 1e-08
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 56 3e-08
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 55 6e-08
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 54 2e-07
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 51 1e-06
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 43 3e-04
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 42 8e-04
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 42 8e-04
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 40 0.002
08_01_0414 + 3684491-3684589,3684770-3684838,3685004-3685033,368... 31 1.1
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 29 3.5
04_04_1137 - 31153104-31153239,31153804-31154660,31155053-311552... 29 3.5
12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104 29 6.0
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 29 6.0
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 6.0
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 29 6.0
04_03_0922 + 20834195-20836603 28 8.0
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 110 bits (264), Expect = 2e-24
Identities = 73/224 (32%), Positives = 117/224 (52%), Gaps = 9/224 (4%)
Frame = +1
Query: 172 PRYITLLSLIVLAVTLIFWWIFSRRYTLRNSVLLMGLSDSGKTLLFVRLAY-SQYRQTFT 348
P + + +V L+ + + + N+++L GLS SGKT+LF +L S ++ T T
Sbjct: 24 PEQVYVAVAVVAVTVLLLVAVSCLKSSKANTIVLSGLSGSGKTILFYQLRDGSTHQGTVT 83
Query: 349 SMKENIEEYITSN--------KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQ 504
SM++N + ++ + K + +VD+PG RL+ K E +A GIV+V+D+ +
Sbjct: 84 SMEQNNDTFVLHSELERRGKVKPVHVVDVPGHARLKPKLDEVLPQAA-GIVYVVDAQDFL 142
Query: 505 KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKS 684
+ AEYLY IL + P+LI CNK D+ A + IK LEKE+N +R ++
Sbjct: 143 STMHAAAEYLYDILTKATVVKKRVPVLIFCNKTDKVTAHSKEFIKKQLEKELNKLRESR- 201
Query: 685 NQLQSVDPSEGNTGSFLGKEGKDFEFSHIXNKVEFAECSAXTND 816
N + S D ++ LG G+ F FS NKV E + T +
Sbjct: 202 NAISSADITDEVK---LGNPGEAFNFSQCQNKVTVTEGAGLTGN 242
>06_03_0025 - 15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 79.4 bits (187), Expect = 3e-15
Identities = 51/143 (35%), Positives = 76/143 (53%)
Frame = +1
Query: 388 KTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQG 567
K + +VD+PG L+ K E +A GIVF +D+ + ++ VAEYLY IL +
Sbjct: 622 KPVHVVDVPGHAGLKPKLDEVLPQAA-GIVFAVDAQDFLSTMQVVAEYLYDILTKATVVK 680
Query: 568 NTTPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEGNTGSFLGKEG 747
+LI CNK D+ A + IK LEKEIN +R ++ + + S D ++ LG G
Sbjct: 681 KRIHVLIFCNKTDKVTAHSKEFIKKQLEKEINKLRESRKD-ISSADTTDEVK---LGNPG 736
Query: 748 KDFEFSHIXNKVEFAECSAXTND 816
+ F FS N+V AE + T +
Sbjct: 737 ETFYFSQCQNRVTVAEGAGLTGN 759
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/114 (28%), Positives = 66/114 (57%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 444
V+++GL +GKT + RL + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 445 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 606
+ + S++ +++V+DS++ ++ I D + TI+ DP++ + +L+ NKQD
Sbjct: 79 KMYLSNSDALIYVVDSLD-RERIIDARQEFQTIIKDPLMANSI--ILVFANKQD 129
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 59.3 bits (137), Expect = 4e-09
Identities = 37/135 (27%), Positives = 70/135 (51%)
Frame = +1
Query: 232 IFSRRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDL 411
+F T VL++GL +GKT + RL + + ++ N+E+ N + D+
Sbjct: 8 LFDSFCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDV 67
Query: 412 PGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 591
GQ++LR + Q+ +A +++V+DS++ ++ I E I+ DP++ + +L+L
Sbjct: 68 GGQDKLR-PLWRQYFRNADALIYVVDSMD-RERIGVAKEEFQAIIRDPLMLNSV--ILLL 123
Query: 592 CNKQDQPLAKGSQVI 636
NKQD A S +
Sbjct: 124 ANKQDLKGAMSSSEV 138
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 58.4 bits (135), Expect = 7e-09
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +1
Query: 217 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 393
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 394 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 573
+ D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNEDELR--D 118
Query: 574 TPLLILCNKQDQPLAKGSQVI 636
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 58.0 bits (134), Expect = 9e-09
Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +1
Query: 217 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 393
L F +FSR ++ + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 394 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 573
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 574 TPLLILCNKQDQPLAKGSQVI 636
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +1
Query: 217 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 393
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 126 LAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 185
Query: 394 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 573
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 186 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 241
Query: 574 TPLLILCNKQDQPLAKGSQVI 636
LL+ NKQD P A + I
Sbjct: 242 AVLLVFANKQDLPNAMNAAEI 262
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = +1
Query: 217 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 393
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 394 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNT 573
+ D+ GQ+++R + + + +G++FV+DS N + + + + L+ +L + ++
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELR--D 118
Query: 574 TPLLILCNKQDQPLAKGSQVI 636
LL+ NKQD P A + I
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/114 (27%), Positives = 65/114 (57%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 444
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLR-PLW 78
Query: 445 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 606
+ ++ G+++V+DS++ ++ + AE+ I+ DP++ + +L+ NKQD
Sbjct: 79 RHYFNNTDGLIYVVDSLDRERIGKAKAEF-QAIVNDPLMLNSV--ILVFANKQD 129
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 55.2 bits (127), Expect = 6e-08
Identities = 32/114 (28%), Positives = 63/114 (55%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 444
V+++GL +GKT + +L + T ++ N+E+ N + D+ GQE+LR +
Sbjct: 20 VVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLR-PLW 78
Query: 445 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD 606
+ ++ +++V+DS++ ++ R AE+ I+ DP + + LL+ NKQD
Sbjct: 79 RHYFNNTDALIYVVDSLDRERIGRARAEF-QAIINDPFMLNSV--LLVFANKQD 129
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 53.6 bits (123), Expect = 2e-07
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Frame = +1
Query: 217 LIFWWIFSRRYTLRNS-VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKT 393
L F +FSR + + +L++GL +GKT + +L + T ++ N+E N +
Sbjct: 3 LTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 394 LKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCD----PII 561
+ D+ GQ+++R + + + +G++FV+DS N ++ + + + L+ +L +
Sbjct: 63 FTVWDVGGQDKIR-PLWRHYFQNTQGLIFVVDS-NDRERVVEARDELHRMLNELQNWKKD 120
Query: 562 QGNTTPLLILCNKQDQPLAKGSQVI 636
+ LL+ NKQD P A + I
Sbjct: 121 ELRDAVLLVFANKQDLPNAMNAAEI 145
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 51.2 bits (117), Expect = 1e-06
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 444
+L++GL +SGKT + +++ ++ NI+ +L I D+ GQ+ +R+ ++
Sbjct: 19 ILMVGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGGQKTIRS-YW 77
Query: 445 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQD-QPLAK 621
+ G+V+V+DS +I++ + D L+ +L + + G LL+ NKQD Q K
Sbjct: 78 RNYFEQTDGLVWVVDSSDIRR-LDDCRAELHNLLKEERLAG--ASLLVFANKQDIQGALK 134
Query: 622 GSQVIK 639
S++ K
Sbjct: 135 PSEIAK 140
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 43.2 bits (97), Expect = 3e-04
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLF--VRLAYSQ-----YRQTFTSMKENIEEYITSNKTLKIVDLPGQE 423
V+++G+ +GKT L V+ Y + + + ++ NI +N L DL GQ
Sbjct: 153 VVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLVFWDLGGQP 212
Query: 424 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 603
LR +E++ A +++VIDS D L +L +QG PLLI NKQ
Sbjct: 213 GLRT-IWEKYYEEAHAVIYVIDSA-AASSFEDAKSALEKVLHHEDLQG--VPLLIFANKQ 268
Query: 604 DQPLA 618
+ P A
Sbjct: 269 ELPAA 273
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 41.5 bits (93), Expect = 8e-04
Identities = 30/125 (24%), Positives = 58/125 (46%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 444
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 445 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKG 624
+ + + +V+++D+ + ++ + + L +L D + T P LIL NK D P A
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFSESKKELDALLSDDSLA--TVPFLILGNKIDIPYAAS 138
Query: 625 SQVIK 639
+ ++
Sbjct: 139 EEELR 143
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 41.5 bits (93), Expect = 8e-04
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYR-------QTFTSMKENIEEYITSNKTLKIVDLPGQE 423
VL++G+ +GKT L ++ + + ++ NI +N L DL GQ
Sbjct: 20 VLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDANAKLVFWDLGGQV 79
Query: 424 RLRNKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQ 603
LR +E++ A I++VID+ D L +L ++G PLLI NKQ
Sbjct: 80 GLRT-IWEKYYQEAHAIIYVIDAA-AASSFEDAKSALEKVLRHEDLKG--APLLIFANKQ 135
Query: 604 DQP 612
D P
Sbjct: 136 DLP 138
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/125 (23%), Positives = 57/125 (45%)
Frame = +1
Query: 265 VLLMGLSDSGKTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFF 444
+L +GL ++GKT L L + Q + EE K DL G + + + +
Sbjct: 23 ILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQ-IARRVW 81
Query: 445 EQHKSSAKGIVFVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKG 624
+ + + +V+++D+ + ++ + + L +L D + P LIL NK D P A
Sbjct: 82 KDYYAKVDAVVYLVDAYD-KERFAESKKELDALLSDDSLA--AVPFLILGNKIDIPYAAS 138
Query: 625 SQVIK 639
+ ++
Sbjct: 139 EEELR 143
>08_01_0414 +
3684491-3684589,3684770-3684838,3685004-3685033,
3685540-3685596,3685884-3685954,3686185-3686266,
3686470-3686559,3686647-3686685
Length = 178
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Frame = +1
Query: 322 YSQYRQTFTSMKENIE--EYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGIVFVIDSI 495
Y + S+ NIE E + L ++DL + + +Q K V D
Sbjct: 51 YQMFIYVIKSLHSNIELLELTNFSMCLTMIDLCFEVAAALEKIDQFVEEQKLDVLSSDKT 110
Query: 496 NIQ-------KEIRDVAEYLYTILCDPIIQGNTTPLLILCNKQDQPLAKGSQVIKGLLE 651
NI+ K +D EYL +++ + + N I K+D LA G QV++ L++
Sbjct: 111 NIEDTKQMISKAKKDEVEYLKSLIEEVEEKNNAMKARIELLKKDDDLAAGKQVLEKLMQ 169
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 29.5 bits (63), Expect = 3.5
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +1
Query: 61 F*STYYFSDLVSVKRKNSTMESEVVKEKIHTEPILNDPRYITLLSLIVLAVTLIFWWIFS 240
F Y S L K++N + E + + + L + + L++ +FS
Sbjct: 626 FCKEYILSSLERAKKRNRAALGTPKVPNVKWEDV-GGLEEVKKVILDTIQLPLLYKHLFS 684
Query: 241 RRYTLRNSVLLMGLSDSGKTLLFVRLAYSQYRQTFTSMK--ENIEEYI 378
+ R+ VLL G +GKTLL +A ++ F S+K E I Y+
Sbjct: 685 SKLGKRSGVLLYGPPGTGKTLLAKAVA-TECSLNFLSVKGPELINMYV 731
>04_04_1137 -
31153104-31153239,31153804-31154660,31155053-31155202,
31156188-31156292,31156405-31156473
Length = 438
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 547 CD-PIIQGNT--TPLLILCNKQDQPLAKGSQVIKGLLEKEINLVRVTKSNQLQSVDPSEG 717
CD PI +GN+ + L+ N D S V KG+ E ++ +++ K+ E
Sbjct: 127 CDLPIARGNSARSDFLVNANSSDNSEDMSSSVPKGVSEGKLTRLKLQKARVPNQSVEHES 186
Query: 718 NTGSFLGKEGKDFE 759
+TG E K E
Sbjct: 187 STGEVANMEHKPKE 200
>12_02_1105 + 26128108-26129032,26129535-26129663,26129924-26131104
Length = 744
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = -2
Query: 560 MIGSHKIVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLE 381
+IG +K + T S+C I S ++ P A + CC + P T + + E
Sbjct: 149 LIGGYKGTVSHYVTGCYSYCESINSTSDGAPCAGMGCC------EAAIPTDLTAWGAMFE 202
Query: 380 VIYSSIFSF 354
+ S ++SF
Sbjct: 203 MNQSKVWSF 211
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 579 GSCVSLNDRITQDCV*VFCYISDFFLYIDRINHKHNSLSTTLVL 448
G+C+ + D + V VF +S L +D+ HK+ L T V+
Sbjct: 159 GTCMVIGDGVLTPAVSVFSAVSGLELSMDKDQHKYILLPITCVI 202
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 478 FVIDSINIQKEIRDVAEYLYTILCDPIIQGNTTPLLIL 591
F ++++ +E+ V YLY LCDP + P+L+L
Sbjct: 285 FFLEAVPPLEELNTVNLYLYIQLCDPRARLVVLPILVL 322
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 554 GSHKIVYRYSATSLISFCILIESITNTIPLALLLCCSKNLFLSLSCP 414
G+ ++VY ++A +F + SI + L CCS+ L + CP
Sbjct: 323 GARRVVYPWNAPVPQAFPLARCSICGAVALRYSFCCSRILCGTCGCP 369
>04_03_0922 + 20834195-20836603
Length = 802
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 181 ITLLSLIVLAVTLIFWWIFSRRY 249
++ +L +LA+ L+ WW S+RY
Sbjct: 456 LSFAALFMLAIALVIWWNKSKRY 478
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,257,956
Number of Sequences: 37544
Number of extensions: 377052
Number of successful extensions: 1008
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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