Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A11
(776 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 36 0.036
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 32 0.44
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 32 0.58
04_01_0545 + 7046861-7047955,7048822-7049436,7052887-7054692 32 0.58
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 31 0.77
05_03_0537 + 15144095-15144220,15144362-15144547 31 0.77
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 31 1.0
11_06_0033 - 19437746-19437916,19438063-19438145,19438266-194383... 31 1.3
11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108... 31 1.3
12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279,101... 30 1.8
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 29 3.1
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 29 3.1
07_01_0476 - 3593555-3594253,3594684-3594850,3594866-3594964,359... 29 4.1
11_06_0613 - 25509044-25509118,25509256-25511275,25511632-25512467 29 5.4
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 5.4
10_08_0506 + 18390892-18391373,18392699-18392798,18393152-183934... 28 7.2
01_06_1452 - 37457529-37458743 28 7.2
08_02_1486 - 27472226-27472867,27472951-27473862 28 9.5
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 28 9.5
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 35.9 bits (79), Expect = 0.036
Identities = 28/135 (20%), Positives = 61/135 (45%)
Frame = +2
Query: 311 SCVKTLIKSNDQEIVLLTVEAISELVKCDEKRRTYSQKEIISPILDILQKEITTENAALI 490
S ++ LI S D+E++ A+S L + Q I S + L + + +A+++
Sbjct: 251 SALQRLIHSQDEEVLTDACWALSYL---SDGTNDKIQAVIESGVFPRLVELLMHPSASVL 307
Query: 491 KQCFRALGNLCCDCDSSRKIILECGGVPNIINLMKKYFSAHSQLSMYAFKTLLNFAIGGQ 670
R +GN+ D + +++ +P ++NL+ + + A T+ N G +
Sbjct: 308 IPALRTVGNIVTGDDMQTQCVIDHQALPCLLNLLTN--NHKKSIKKEACWTISNITAGNR 365
Query: 671 EFTNAMVDGGVVEML 715
E A+++ ++ L
Sbjct: 366 EQIQAVINANIIAPL 380
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 434 SPILDILQKEITTENAALIKQCFRALGNLCCDCDSSRKIILECGGVPNIINLMKKYFSAH 613
S + I K +++ + + +Q ALGN+ D R ++L GG+ ++ + + H
Sbjct: 163 SGAVPIFVKLLSSPSEDVREQAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNE----H 218
Query: 614 SQLSMY--AFKTLLNFAIG 664
++LSM A TL NF G
Sbjct: 219 AKLSMLRNATWTLSNFCRG 237
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/95 (20%), Positives = 41/95 (43%)
Frame = +2
Query: 431 ISPILDILQKEITTENAALIKQCFRALGNLCCDCDSSRKIILECGGVPNIINLMKKYFSA 610
+ PILDI+ + I + + ++ AL +C + +L+ G P ++NL+ A
Sbjct: 276 VKPILDIISQLIHSVDEKILGDACWALCYICDGVSDGIQHVLDAGACPQLVNLL---MHA 332
Query: 611 HSQLSMYAFKTLLNFAIGGQEFTNAMVDGGVVEML 715
+ + + L + G +V+ ++ L
Sbjct: 333 SANILLPVITVLARISSGDDAQVQVLVENDILNYL 367
>11_01_0221 -
1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 404 RRTYSQKEIISPILDILQKEITTENAALIKQCFRALGNLCCDC 532
+ +Y +EI+ +D+L K + +E +AL ALG++ C
Sbjct: 682 KESYITEEIVQKSIDVLVKVVESEGSALASTAMEALGHIGLHC 724
>04_01_0545 + 7046861-7047955,7048822-7049436,7052887-7054692
Length = 1171
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 485 LIKQCFRALGNL--CCDCDSSRKIILECGGVPNIINLMKKYFSAHSQ 619
+ KQ FR +G L + ++ I+ +CGG+P +I + +Y ++ +
Sbjct: 567 IFKQEFRGVGTLRDAHTLEEAKYILAKCGGIPEVIMALARYVASEQE 613
>12_01_0222 -
1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 404 RRTYSQKEIISPILDILQKEITTENAALIKQCFRALGNLCCDC 532
+ +Y +EI+ +D+L K + +E +AL ALG++ C
Sbjct: 686 KESYITEEIVQKSIDVLVKVVESEGSALASTAMEALGHIGLRC 728
>05_03_0537 + 15144095-15144220,15144362-15144547
Length = 103
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = +2
Query: 356 LLTVEAISELVKCDEKRRTYSQKEIISPILDILQKEITTENAALIKQCFRALGNLCCDCD 535
LL + A S + D ++Y Q + SP+L I Q++I A + + G+L D +
Sbjct: 9 LLAIAACSASAQFDVLGQSYGQYLLQSPLL-IQQQDINIVQAIAQQLQLQQFGDLYFDRN 67
Query: 536 SSRKIILECGGVPNIINLMKKYFSAHSQLS 625
++ L VP+ + +Y+ A S ++
Sbjct: 68 LAQAQALLASNVPSKYRIYPRYYGAPSTIT 97
>05_01_0168 +
1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +2
Query: 326 LIKSNDQEIVLLTVEAISELVKCDEKRRTYSQKEIISPILDILQKEITTENAALIKQCFR 505
L+ S + ++ L AI+E+ C+ R + I + K + + L ++C R
Sbjct: 55 LLASGEGDVPLFAARAIAEV--CEGVRPWATSFARYGAIEALRDKLLAIDCIELAEECLR 112
Query: 506 ALGNLCCDCDSSRKIILEC--GGVPNIINLMKKYFSAHSQ 619
ALG + +C EC GVP + +FS H Q
Sbjct: 113 ALGVISMECPK------ECLSHGVPAAVLQFFDFFSMHKQ 146
>11_06_0033 -
19437746-19437916,19438063-19438145,19438266-19438359,
19438478-19438551,19438825-19438861,19440767-19440844,
19440927-19441022,19441719-19441815,19441910-19442015,
19442136-19442208,19442537-19442680,19443241-19443681
Length = 497
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 440 ILDILQKEITTENAALIKQCFRALGNLCCDCDSSRKIILECGGVPNIINLM 592
IL++ IT N LI+ + N C D ++ +I CGG+P +I +
Sbjct: 385 ILELFLDCITEPNERLIEFGIGGICNSCAD-PANASVITHCGGIPLVIQCL 434
>11_01_0130 -
1079515-1079685,1079847-1079961,1080237-1080328,
1080435-1080520,1080957-1081056,1082180-1082210,
1082416-1082471
Length = 216
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 182 ECSAXKSTSLETLVIQNISNVKELKSKLSEIIKKGKDYEFDVSSCVKTLIKSNDQEIVLL 361
EC K S E ++ + K KS + +KK K YE + ++ +DQ I+L
Sbjct: 38 ECFLQKKASAEVEKAKDYTKAKN-KSAAIQCLKKKKLYETQIEQLANFQLRVHDQIIMLE 96
Query: 362 TVEAISELV 388
+ +A ++ V
Sbjct: 97 SAKATTDTV 105
>12_01_0133 -
1011442-1011609,1011792-1011906,1012188-1012279,
1012384-1012469,1012989-1013088,1014139-1014333
Length = 251
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 182 ECSAXKSTSLETLVIQNISNVKELKSKLSEIIKKGKDYEFDVSSCVKTLIKSNDQEIVLL 361
EC K S E ++ + K KS + +KK K YE + ++ +DQ I+L
Sbjct: 74 ECFLQKKASAEVERAKDYTKAKN-KSAAIQCLKKKKLYETQIEQLANFQLRVHDQIIMLE 132
Query: 362 TVEAISELV 388
+ +A ++ V
Sbjct: 133 SAKATTDTV 141
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 57 IKSYPHTFHTNINYAFNRIDIK*PLSCVWVYKVVL*SSAIWM 182
+K YPH FH F R P C+ ++ +++ S IW+
Sbjct: 180 VKQYPHIFHE--KSIFGRFPYLLPCLCISLFALLVLLSCIWL 219
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 57 IKSYPHTFHTNINYAFNRIDIK*PLSCVWVYKVVL*SSAIWM 182
+K YPH FH F R P C+ ++ +++ S IW+
Sbjct: 170 VKQYPHLFHE--KSIFGRFPYLLPCLCISLFALLVLISCIWL 209
>07_01_0476 -
3593555-3594253,3594684-3594850,3594866-3594964,
3595620-3595806,3595880-3595948,3596551-3596752,
3597124-3597362,3598374-3598637
Length = 641
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +2
Query: 344 QEIVL---LTVEAISELVKCDEKRRTYSQKEIIS 436
Q+IVL LTV +S+ +KCD+ RT + +++S
Sbjct: 52 QDIVLPGGLTVAGVSKSIKCDKGERTRFRSDVLS 85
>11_06_0613 - 25509044-25509118,25509256-25511275,25511632-25512467
Length = 976
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 221 VIQNISNVKELKSKLSEIIKKGKDYEFDVSSCVKTLIKSNDQEIVLLTVEAISELVKCDE 400
+ + I ++KEL +++E+ + Y+FD ++ T + +L + I+ELV +E
Sbjct: 122 IAEGICDIKELADEVAELRAR---YKFDAAAAATTPATATVDPRILALYKDITELVGIEE 178
Query: 401 KR 406
R
Sbjct: 179 AR 180
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/105 (21%), Positives = 45/105 (42%)
Frame = +2
Query: 233 ISNVKELKSKLSEIIKKGKDYEFDVSSCVKTLIKSNDQEIVLLTVEAISELVKCDEKRRT 412
+ V++++ +L K D E S K +D E L + + EL + E+
Sbjct: 921 LKQVEDMRKELQNSWKAATDAE---SRAAVAEAKCSDLETKLKSRKENDELFQLKEELEK 977
Query: 413 YSQKEIISPILDILQKEITTENAALIKQCFRALGNLCCDCDSSRK 547
Y ++ + + KEI N + +KQ AL + + ++ +K
Sbjct: 978 YKEEAQANKSYMLQYKEIANSNESALKQMESALQDFKTESETIKK 1022
>10_08_0506 +
18390892-18391373,18392699-18392798,18393152-18393485,
18393756-18393868,18394437-18394565,18394746-18394839,
18394942-18395025,18395265-18395896,18396662-18396951,
18397098-18397242,18397876-18397973,18398075-18398156,
18398607-18398612,18398845-18398928
Length = 890
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 473 ENAALIKQCFRA----LGNLCCDCDSSRKIILECGGVPNIINLMKKYF 604
+ ++L++ C A L NL D S ++I CGG+ + +L+ K+F
Sbjct: 642 DESSLLEDCLLASVKVLMNLANDNPSGCELIASCGGLNTMASLIMKHF 689
>01_06_1452 - 37457529-37458743
Length = 404
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 464 ITTENAALIKQCFRALGNLCCDCDSSRKIILECGGVPNIINLMKKYFSAHSQLSMYAFKT 643
+ ++ AA R L L +C+ SR ++ GGV ++++ + SA S A
Sbjct: 105 LLSDAAAAQVGALRRLRELAAECEDSRAMLESQGGVFDVLSRVVTSGSACSTAREEAVGV 164
Query: 644 LLNFAIGGQEFTNAMV-DGGVVEMLQMVV 727
L + I QE G + E L V+
Sbjct: 165 LASLRIPEQELIGVSTRHGNLAESLTAVL 193
>08_02_1486 - 27472226-27472867,27472951-27473862
Length = 517
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 578 IINLMKKYFSAHSQLSMYAFKTLL-NFAIGGQEFTNAMVDGGVVEMLQ 718
++ L K+ + +M K LL + IGG E T+ V+ G+ EMLQ
Sbjct: 280 MLKLEKEGGDGKTAFTMTNVKALLMDMVIGGTETTSNTVEWGMAEMLQ 327
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 251 LKSKLSEIIKKGKDYEFDVSSCVKTLIKSNDQEIVLLTVEAISE 382
L + L+ + YEF +C+ +I+ ND +I LL + I E
Sbjct: 78 LLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLDLPGIIE 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,272,495
Number of Sequences: 37544
Number of extensions: 259195
Number of successful extensions: 667
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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