Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A08
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb CG106... 216 5e-55
UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 171 2e-41
UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular organisms... 169 7e-41
UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 129 9e-29
UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102, w... 124 3e-27
UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming] beta-... 123 4e-27
UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=3... 122 1e-26
UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 121 2e-26
UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 121 2e-26
UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific suc... 111 2e-23
UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=2... 111 2e-23
UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=8... 111 3e-23
UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 109 1e-22
UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=7... 108 2e-22
UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit, putat... 105 1e-21
UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase be... 105 1e-21
UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta s... 105 2e-21
UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase be... 103 5e-21
UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase (ADP-form... 103 7e-21
UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1; ... 102 1e-20
UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila ... 102 1e-20
UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=1... 100 4e-20
UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 99 6e-20
UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7... 99 1e-19
UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit; ... 98 3e-19
UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;... 98 3e-19
UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3... 97 4e-19
UniRef50_Q8D2D7 Cluster: SucC protein; n=4; Gammaproteobacteria|... 96 8e-19
UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=9... 95 2e-18
UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, wh... 94 4e-18
UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta ... 93 1e-17
UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=1... 90 5e-17
UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=1... 89 1e-16
UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=2... 88 2e-16
UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 84 4e-15
UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit, p... 83 6e-15
UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6... 82 1e-14
UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n... 81 4e-14
UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8... 81 4e-14
UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2... 79 2e-13
UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chai... 79 2e-13
UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n... 74 4e-12
UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit f... 74 5e-12
UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n... 73 6e-12
UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1; ... 73 1e-11
UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), bet... 72 2e-11
UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit; ... 71 3e-11
UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n... 71 3e-11
UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5... 67 4e-10
UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1... 67 4e-10
UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1... 65 2e-09
UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit; ... 65 2e-09
UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6... 64 4e-09
UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 63 7e-09
UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=4... 62 1e-08
UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine ligase-... 58 2e-07
UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1... 57 6e-07
UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n... 57 6e-07
UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma j... 56 8e-07
UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n... 54 5e-06
UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus ... 52 2e-05
UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n... 52 2e-05
UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4; ... 50 5e-05
UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho... 50 5e-05
UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1; Fervidobact... 50 7e-05
UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine ligase-... 48 2e-04
UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine ligase-... 48 3e-04
UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family; ... 47 6e-04
UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 45 0.002
UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11; Chlorobi... 40 0.054
UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3; Chroococcal... 39 0.17
UniRef50_Q6NDJ4 Cluster: DUF81 precursor; n=2; Rhodopseudomonas ... 38 0.38
UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n... 36 1.5
UniRef50_Q4YZZ3 Cluster: Putative uncharacterized protein; n=2; ... 35 2.0
UniRef50_A6DBG6 Cluster: Sensor protein; n=1; Caminibacter media... 35 2.7
UniRef50_UPI0000F2AFED Cluster: PREDICTED: similar to seven tran... 33 8.2
UniRef50_Q6HGL7 Cluster: Possible carbamoyl-phosphate synthase l... 33 8.2
UniRef50_Q5NQR6 Cluster: Cardiolipin synthase; n=2; Zymomonas mo... 33 8.2
UniRef50_Q040L5 Cluster: Predicted membrane protein; n=3; Lactob... 33 8.2
>UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb
CG10622-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to Sucb CG10622-PA, isoform A - Apis
mellifera
Length = 370
Score = 216 bits (528), Expect = 5e-55
Identities = 100/161 (62%), Positives = 128/161 (79%), Gaps = 1/161 (0%)
Frame = +2
Query: 311 TRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTN-ALSGFKADEYVVKAQILAGGRGKG 487
TR+LNL E+ SK+LLR VS+Q+F I+D N AL A+EYV+KAQ+LAGGRGKG
Sbjct: 26 TRNLNLLEYQSKELLRDCGVSVQNFAIVDDLNKANSALQNLHANEYVIKAQVLAGGRGKG 85
Query: 488 HFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
FDNGFKGGVHLTK+R ++D+ KNM+G++L TKQT ++GILV K+M+AESVNI RETY
Sbjct: 86 WFDNGFKGGVHLTKDRKAVIDVVKNMLGHRLFTKQTSEDGILVQKIMIAESVNIARETYI 145
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I+M+R +NG ++ASPAGGMDIE VAEK P L+KT+P+ I
Sbjct: 146 CILMDRQYNGPVLIASPAGGMDIETVAEKNPELIKTIPLDI 186
>UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=55; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 432
Score = 171 bits (415), Expect = 2e-41
Identities = 88/166 (53%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Frame = +2
Query: 275 LASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVV 451
LA+ + ++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+
Sbjct: 23 LAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVL 82
Query: 452 KAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMV 631
KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMV
Sbjct: 83 KAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMV 142
Query: 632 AESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
AE+++I RETY +I+M+RS NG +V SP GG+DIE VA P L+
Sbjct: 143 AEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELI 188
>UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular
organisms|Rep: Suclg2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 419
Score = 169 bits (411), Expect = 7e-41
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 RVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGG 475
RV R LNLQE+ SK L++ V++Q F + D+ + A KA E V+KAQILAGG
Sbjct: 18 RVSPRRWLNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGG 77
Query: 476 RGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKR 655
RGKG F++G KGGVHLTK+ + +LA M+G L TKQTPKEG+ V VMVAE+++I R
Sbjct: 78 RGKGVFNSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQTPKEGVEVKTVMVAEALDISR 137
Query: 656 ETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
ETYF+I+M+RS NG +V SP GGMDIE VA TP L+
Sbjct: 138 ETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAATPELI 175
>UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor; n=23; Fungi/Metazoa
group|Rep: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 427
Score = 129 bits (311), Expect = 9e-29
Identities = 65/154 (42%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQD-FRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGH 490
RHL++ E+ S LLR+Y + + F + A ++ V+KAQ L GGRGKGH
Sbjct: 29 RHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIKAQALTGGRGKGH 88
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
FD G+K GVH+ ++ + D+AK M+ + LITKQT G V+ V + + V+ K E Y S
Sbjct: 89 FDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYLS 148
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVK 772
I+M+R I+AS GGM+IE VAE+TP +K
Sbjct: 149 ILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIK 182
>UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=5;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_102, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 449
Score = 124 bits (299), Expect = 3e-27
Identities = 64/158 (40%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Frame = +2
Query: 323 NLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGF--KADEYVVKAQILAGGRGKGHFD 496
+L E+ SKDL+R + V +Q I + D ++ + ++K+Q+ AGGRGKG
Sbjct: 44 DLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGKGTLS 103
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
+G KGGV + K +++ + K MIG KL+T QTPKEG+ VN V+V E V+I R+ Y + +
Sbjct: 104 SGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAVLVHEGVDIVRQLYLAFI 163
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
++R+ AIVAS GGM+IE VA+ P+ + +P+ I
Sbjct: 164 LDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDI 201
>UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor; n=82; cellular
organisms|Rep: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 463
Score = 123 bits (297), Expect = 4e-27
Identities = 64/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 210
>UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=34;
cellular organisms|Rep: Succinyl-CoA synthetase beta
chain - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 398
Score = 122 bits (294), Expect = 1e-26
Identities = 69/159 (43%), Positives = 95/159 (59%), Gaps = 4/159 (2%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGHFD 496
+N+ E+ +K LL+ Y + + I S + A + YVVK+QI AGGRGKG F
Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60
Query: 497 N---GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
KGGV L K+ D++V AK+M+GN L+TKQT G VN++ + + +I RE Y
Sbjct: 61 ELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYL 120
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
SI+++RS A V S GGMDIEAVAE TP + TV +
Sbjct: 121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAI 159
>UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor; n=7; Trichomonas
vaginalis|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor - Trichomonas
vaginalis
Length = 407
Score = 121 bits (292), Expect = 2e-26
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGH 490
R+ N+ E SK++ KY V+ + S + A V+KAQ+ GGRGKGH
Sbjct: 8 RNFNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGGRGKGH 67
Query: 491 F-DNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
+ + GFK GVH K+ D+ +AK M+G+ L+TKQT K+G+L VM+++ V +KRE YF
Sbjct: 68 WLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYF 127
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+I+++R ++AS GG++IE VA P +
Sbjct: 128 AILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKI 161
>UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=35; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 421
Score = 121 bits (291), Expect = 2e-26
Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 4/163 (2%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT--NALSGF--KADEYVVKAQILAGGRG 481
R LN+ E+ +L+ KY V++ + S L+ A+ E VVK+QILAGGRG
Sbjct: 25 RRLNIHEYQGAELMGKYGVNVPK-GVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRG 83
Query: 482 KGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRET 661
G F +G KGGVH+ K RD+ ++A M+G L+TKQT +G +V+KV + E +++ E
Sbjct: 84 LGTFKSGLKGGVHIVK-RDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEM 142
Query: 662 YFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
YFSI+++R G I+A GG IE +AEK P ++ VP+ +
Sbjct: 143 YFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDV 185
>UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit; n=1; Toxoplasma
gondii|Rep: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit - Toxoplasma gondii
Length = 498
Score = 111 bits (267), Expect = 2e-23
Identities = 59/170 (34%), Positives = 100/170 (58%), Gaps = 11/170 (6%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKAD---------EYVVKAQI 463
R LNL E+ S +++++ ++ F + + + + F ++ ++VVKAQ+
Sbjct: 70 RFLNLHEYQSMRIMKEFHITTPKFAVASTAKEAEQEAATFLSESPSGDGEPVDFVVKAQV 129
Query: 464 LAGGRGKGHF-DNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAES 640
LAGGRG G F +NG++GGV + ++ ++ +A+ M+G L+TKQT KEG L NKV+V E
Sbjct: 130 LAGGRGLGFFRENGYQGGVQVCESPREVGIVAEKMLGKTLVTKQTGKEGKLCNKVLVTER 189
Query: 641 VNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I++E Y +I+M+R G ++ S GG IE +A P + +P+ I
Sbjct: 190 FFIRKEKYVAILMDRGAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDI 239
>UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=29;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 397
Score = 111 bits (267), Expect = 2e-23
Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQD-FRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
+N+ E+ +K LL+ Y + + I+ + A YVVK+QI AGGRGKG F
Sbjct: 1 MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60
Query: 497 N---GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
KGGV L K+ +++V +++M+GN L+T QT G VN++ + + +I RE Y
Sbjct: 61 ELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTGDAGKQVNRLYIEDGADIARELYC 120
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
S++++RS A V S GGMDIEAVA TP + T+ +
Sbjct: 121 SLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKIHTIAI 159
>UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=80;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhizobium loti (Mesorhizobium loti)
Length = 397
Score = 111 bits (266), Expect = 3e-23
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 7/162 (4%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQD----FRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKG 487
+N+ E+ K LL+ + + + F+ +++ AL G YVVK+QI AGGRGKG
Sbjct: 1 MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAARALPG---PLYVVKSQIHAGGRGKG 57
Query: 488 HFDN---GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRE 658
F KGGV L K+ +V A M+G+ L+TKQT G VN++ + + +I+RE
Sbjct: 58 KFKELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQVNRLYIEDGADIERE 117
Query: 659 TYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
Y SI+++RS A V S GGMDIEAVA TP V TV +
Sbjct: 118 LYLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAI 159
>UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=64;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 388
Score = 109 bits (261), Expect = 1e-22
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQV----SIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKG 487
+N+ E+ K++LRKY V I F + ++ L G +VVKAQI AGGRGKG
Sbjct: 1 MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGG---PVWVVKAQIHAGGRGKG 57
Query: 488 HFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
GGV + K+ D++ A N++G L+T QT EG VN++++ E +IK+E Y
Sbjct: 58 -------GGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVNRLLIEEGADIKKELYV 110
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
S+V++R A++AS GGMDIE VA TP + T+ V
Sbjct: 111 SLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIV 149
>UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=76;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Bacillus subtilis
Length = 385
Score = 108 bits (259), Expect = 2e-22
Identities = 54/152 (35%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRI-IDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
+N+ E+ K++LRKY VS+ + ++ ++ + + YVVKAQI AGGRGK
Sbjct: 1 MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV + K+ D++ A+ ++G L+T QT +G ++ ++++ E +IK+E Y +V
Sbjct: 58 ----GGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLV 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVK 772
++R+ + ++AS GG +IE VAEKTP +K
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIK 145
>UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit,
putative; n=1; Babesia bovis|Rep: Succinly CoA-ligase
beta subunit, putative - Babesia bovis
Length = 436
Score = 105 bits (253), Expect = 1e-21
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Frame = +2
Query: 236 AAFKNLKSFKLINLASSTYCPRVIST-RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT 412
A +++ + KL + C ST R+LN+ E +L+++ + R+ S +
Sbjct: 10 ALARSIVNGKLSFKGDNASCNHARSTKRYLNVPEFGGMRILKEHGIPTPMNRLARSPSEA 69
Query: 413 NA-----LSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNK 577
A L K E V+KA +L GGRGKG F GV L K+ ++ LA+ MIGN
Sbjct: 70 EAMTHEILESTKCGEVVLKALVLTGGRGKGKFVGTDISGVELAKSPERAKTLAEGMIGNV 129
Query: 578 LITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKT 757
L+TKQT G+ +V+VAE +N+ +E Y S +++RS +A+ GG ++E V+EK
Sbjct: 130 LVTKQTGASGLKCKEVLVAEKLNLAKERYISFMLDRSSCSIMAIATKHGGGNVEEVSEKD 189
Query: 758 PHLVKTVPV 784
P V TV +
Sbjct: 190 PSAVLTVKI 198
>UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=1; Theileria parva|Rep:
ATP-specific succinyl-CoA synthetase beta subunit,
putative - Theileria parva
Length = 453
Score = 105 bits (252), Expect = 1e-21
Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 7/182 (3%)
Frame = +2
Query: 260 FKLINLASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKA- 436
FK N ++ + +S R LN+ E+ +L++ V + +FR ++ A K+
Sbjct: 11 FKYFNCVNN-FSQCKLSKRFLNVSEYIGMTILKRNGVRVPEFR--NATTPEEAFEAGKSI 67
Query: 437 ------DEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTP 598
E VVKA +L GGRGKG F+ GFKG V + K+ ++ A+ M+GN L TKQT
Sbjct: 68 QQLTNTPELVVKALVLTGGRGKGTFNTGFKG-VEIVKSPSEVSACARGMLGNYLTTKQTV 126
Query: 599 KEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTV 778
+G+L +V+VA+ ++IK E Y S ++R G +A+ GG ++E +A + P V T+
Sbjct: 127 GKGLLCTEVLVAQKLSIKSERYLSFTLDRGSGGIVAIATKHGGGNVEEIAHQHPDAVLTL 186
Query: 779 PV 784
+
Sbjct: 187 QI 188
>UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta
subunit; n=1; Scophthalmus maximus|Rep: Succinate-CoA
ligase ADP-forming beta subunit - Scophthalmus maximus
(Turbot)
Length = 188
Score = 105 bits (251), Expect = 2e-21
Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 1/135 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S LL++ +S+ + S + A++ + + VVKAQ+LAGGRGKG
Sbjct: 53 RNLSLHEYMSIGLLKEAGISVPVGLVASSSEEAYAVAKQIGSKDLVVKAQVLAGGRGKGT 112
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F+ G KGGV + + ++ D++ MIG KL TKQT + G + N+V + E +RE YF+
Sbjct: 113 FEGGLKGGVKIVYSPEEARDISSQMIGRKLYTKQTGEAGRICNQVFICERRYPRREYYFA 172
Query: 671 IVMERSFNGAAIVAS 715
I MERSF G ++ S
Sbjct: 173 ITMERSFQGPVLIGS 187
>UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=9; Plasmodium|Rep: ATP-specific
succinyl-CoA synthetase beta subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 462
Score = 103 bits (247), Expect = 5e-21
Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Frame = +2
Query: 305 ISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNA----LSGFKAD-EYVVKAQILA 469
I R+L++ E+ S DLLR + V + + + L D + V+KAQ+L+
Sbjct: 45 IGKRYLSIHEYLSVDLLRSHNVPCPEGYAAKTAEEAEEKALLLQNVCGDNDLVIKAQVLS 104
Query: 470 GGRGKGHF-DNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVN 646
GGRG G+F +N F+GGVH+ +N ++ ++A M+ N LITKQ+ EG N V + E
Sbjct: 105 GGRGVGYFKENNFEGGVHVCRNSMEVKEIATKMLNNTLITKQSGPEGKKCNTVFICERFY 164
Query: 647 IKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I++E Y + +++R+ +G ++ S GG IE + +K P + + + I
Sbjct: 165 IRKERYIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDI 212
>UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase
(ADP-forming) beta chain; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Probable succinate-CoA ligase
(ADP-forming) beta chain - Protochlamydia amoebophila
(strain UWE25)
Length = 389
Score = 103 bits (246), Expect = 7e-21
Identities = 49/156 (31%), Positives = 90/156 (57%), Gaps = 1/156 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNAL-SGFKADEYVVKAQILAGGRGKGHFD 496
+N E +K +LRKY + + DF I S + + ++ ++K Q+ AGGRGK
Sbjct: 1 MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQYQLQSAIIKVQVHAGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV L N +I++ ++ +IG K+I +QT G++ ++V+++ ++ IK+E Y I
Sbjct: 58 ----GGVKLATNPQEILEFSQELIGKKIINEQTGPSGMISHQVLISPAILIKKEFYLGIT 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+ R ++ASP GG++IE +A + P+ + +P+
Sbjct: 114 INRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPI 149
>UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1;
Ostreococcus tauri|Rep: Succinyl-CoA-ligase beta subunit
- Ostreococcus tauri
Length = 203
Score = 102 bits (244), Expect = 1e-20
Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT--NALSGFKADEYVVKAQILAGGRGKG 487
RHLN+ E+ +++ K V + + + LD A + E VVK+QILAGGRG G
Sbjct: 22 RHLNVHEYQGAEIMMKNGVRVP-IGVACATLDDVDAACDALRGREVVVKSQILAGGRGLG 80
Query: 488 HFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
F +GF GGVH+ + A+ M+G L+TKQ+ G VN + VAE + + RE YF
Sbjct: 81 TFASGFAGGVHVVAKTEARAT-AEKMLGGTLVTKQSGPAGKPVNVLYVAEKLKLTREMYF 139
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+++++R+ G ++AS GG IE +A P +
Sbjct: 140 ALMLDRASAGPLVIASAEGGTSIEDLAATQPEKI 173
>UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG10622-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 112
Score = 102 bits (244), Expect = 1e-20
Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 SFKLINLASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIID-SKLDTNALSGFK 433
SF L + ++ + + R+LNL E SKDLL+KY V+IQ F++++ SK D + F+
Sbjct: 2 SFLLKAVTTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFE 61
Query: 434 ADEYVVKAQILAGGRGKGHFDNGFKGGVHLT 526
EYVVKAQILAGGRGKG FDNGFKGGVH+T
Sbjct: 62 CPEYVVKAQILAGGRGKGTFDNGFKGGVHIT 92
>UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=155;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 399
Score = 100 bits (240), Expect = 4e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSI-QDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
+N+ EH +K +L ++ + + F A +VVK+QI AGGRGKG F+
Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60
Query: 497 N---GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
KGGV + K+ +++ A+ M+G L+T QT +G VN++ + E I +E Y
Sbjct: 61 GLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYL 120
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
S++++R+ + ++VAS GGMDIE VA TP + T +
Sbjct: 121 SLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTI 159
>UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=2; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter propionicus (strain DSM 2379)
Length = 394
Score = 99 bits (238), Expect = 6e-20
Identities = 50/155 (32%), Positives = 89/155 (57%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ + E+ +KD+L + ++I R+ + + V+KAQ+ AGGRGKG
Sbjct: 1 MKIHEYQAKDILAGFGIAIPRGRVAMNASQVERAARELGGHCVIKAQVYAGGRGKG---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ + ++ + ++AK ++G KL+T QT EG+ V +++V E V+I+RE Y SI +
Sbjct: 57 ---GGIRVAQDPGQAGEIAKELLGTKLVTPQTGPEGLEVRRLLVEEVVDIERELYLSITL 113
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+R + ++AS GGMDIE +A P ++ + +
Sbjct: 114 DRESSRYCLIASAEGGMDIEEIARTAPDRIRILTI 148
>UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7;
Chlamydiaceae|Rep: Succinyl-CoA synthetase beta chain -
Chlamydophila caviae
Length = 388
Score = 98.7 bits (235), Expect = 1e-19
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLD-TNALSGFKADEYVVKAQILAGGRGKGHFD 496
++L E+ +KDLL Y ++I +R+ S + AL D VVK Q+ AGGRGK
Sbjct: 1 MHLHEYQAKDLLVSYDIAIPPYRVASSVEEGQQALKELAIDAGVVKVQVHAGGRGKN--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV + K+ I+ ++ + ++ QT E + V KV++ VNI E Y +++
Sbjct: 58 ----GGVVVAKSPSDILAAVDKLLRMRFVSNQTSGEALPVEKVLITPLVNIAAEYYLAVI 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
M+R AI+ S AGG+DIE VA+K P + TVP+
Sbjct: 114 MDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPL 149
>UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 388
Score = 97.9 bits (233), Expect = 3e-19
Identities = 54/155 (34%), Positives = 87/155 (56%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K L +Y + I + R+ S +T + A VVKAQI AGGRGK
Sbjct: 1 MKLHEYQAKQLFHRYGIPIPEGRLARSVEETGQAARAFAGRCVVKAQIHAGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GGV + D+ ++A+ ++ + L+T QT +G+ V ++V E V + RE Y S+ +
Sbjct: 57 ---GGVARVNSVDQARNIAQRLLQHTLVTAQTGDQGLYVGSLLVEEIVPVAREMYLSLTL 113
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+R+ ++ASP GG+DIE A KTP V+ + +
Sbjct: 114 DRANGRYCLIASPDGGVDIEQTARKTPERVRRLTI 148
>UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;
n=1; Theileria annulata|Rep: Succinyl-coA ligase,
subunit, putative - Theileria annulata
Length = 433
Score = 97.9 bits (233), Expect = 3e-19
Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 10/195 (5%)
Frame = +2
Query: 230 IMAAFKNLKS--FKLINLASSTYCPRVI--STRHLNLQEHHSKDLLRKYQVSIQDFRIID 397
I+ FK + + K N+ S+ ++ + R LN+ E+ +L++ V + +FR
Sbjct: 2 IIGTFKTITNVYIKSFNINSNFKSRELVKFTRRWLNVSEYIGMTVLKRNGVRVPEFRSAT 61
Query: 398 SKLDT-NALSGFKA----DEYVVKAQILAGGRGKGHFDN-GFKGGVHLTKNRDKIVDLAK 559
+ + A + E V+KA +L GGRGKG F N GFK GV + + + + AK
Sbjct: 62 TPEEAFEASKSIQQVTGKPELVIKALVLTGGRGKGVFSNTGFK-GVEVVNSPESASECAK 120
Query: 560 NMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIE 739
M+GN L TKQT +G+L ++V++A+ +++K E Y S ++R G +A+ GG ++E
Sbjct: 121 GMLGNYLTTKQTVGKGLLCSQVLLAQKLSLKNERYLSFTLDRGSGGIVAIATKHGGGNVE 180
Query: 740 AVAEKTPHLVKTVPV 784
+A + P V T+ V
Sbjct: 181 EIAHEYPDSVLTLSV 195
>UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhodopirellula baltica
Length = 394
Score = 97.1 bits (231), Expect = 4e-19
Identities = 57/152 (37%), Positives = 87/152 (57%), Gaps = 2/152 (1%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEY-VVKAQILAGGRGKGH-F 493
+ + E+ K L R V + D ++ + + A + VVKAQI AGGRGKG+
Sbjct: 1 MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 60
Query: 494 DNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSI 673
DN + GV L K+ ++ A+ ++G KL+T QT EG V+KV V +I RE Y I
Sbjct: 61 DNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYLGI 120
Query: 674 VMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
V++R+ + ++ S GG++IE VAE+TP L+
Sbjct: 121 VVDRAGSKPVLMVSTEGGVEIETVAEETPELI 152
>UniRef50_Q8D2D7 Cluster: SucC protein; n=4;
Gammaproteobacteria|Rep: SucC protein - Wigglesworthia
glossinidia brevipalpis
Length = 396
Score = 96.3 bits (229), Expect = 8e-19
Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT--NALSGFKADEYVVKAQILAGGRGKGHF 493
+NL E+ +K L KY++ I I +LD +S +V+K QI AGGRGK
Sbjct: 1 MNLHEYQAKKLFNKYEIPIPKGYCI-KELDEIEKTISNLSTGPWVIKCQIHAGGRGKS-- 57
Query: 494 DNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSI 673
GG+ +T ++ +I + AK +GNKLIT QT K G VN +++ + IK+E Y S
Sbjct: 58 -----GGIKITNSKKEIHEFAKKWLGNKLITYQTDKNGQKVNYLLIEKKTIIKKELYLSF 112
Query: 674 VMERSFNGAAIVASPAGGMDIEAVAEK 754
V+ R + +++S +GG+DIE + +K
Sbjct: 113 VINRKKSSIMLISSDSGGVDIENIFKK 139
>UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=99;
Proteobacteria|Rep: Succinyl-CoA synthetase beta chain -
Shigella flexneri
Length = 388
Score = 95.1 bits (226), Expect = 2e-18
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQ-DFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
+NL E+ +K L +Y + + + A S A +VVK Q+ AGGRGK
Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV + +++ I A+N +G +L+T QT G VN+++V + +I +E Y V
Sbjct: 58 ----GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAV 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTV 778
++RS +AS GG++IE VAE+TPHL+ V
Sbjct: 114 VDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKV 147
>UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_53, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 429
Score = 93.9 bits (223), Expect = 4e-18
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +2
Query: 440 EYVVKAQILAGGRGKGHF-DNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILV 616
+ VVKAQ GGRGKG+F +NGF G+H+ N + + + A M+GN LITKQT G
Sbjct: 61 DLVVKAQCHTGGRGKGYFKENGFNSGIHIVSNPEDVKEYASKMLGNTLITKQTGSLGKKC 120
Query: 617 NKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVK 772
V V E +++E Y SI+++R+ G IVAS GG+ IE E P+ +K
Sbjct: 121 EMVYVVERNFLRKELYLSILLDRNTGGLGIVASEKGGIHIE---ESDPNYIK 169
>UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta
chain; n=1; Desulfotalea psychrophila|Rep: Probable
succinyl-CoA synthetase, beta chain - Desulfotalea
psychrophila
Length = 386
Score = 92.7 bits (220), Expect = 1e-17
Identities = 53/155 (34%), Positives = 82/155 (52%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ + E+ +K L RKY + + + + + + VKAQI AGGRGKG
Sbjct: 1 MKIHEYQAKQLFRKYSIPVPEGLLCTNLQEVKTALKSLQLPIAVKAQIHAGGRGKG---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GGV L K ++V A +++G L+T QT G V+K+++ E V+I RE Y SI++
Sbjct: 57 ---GGVKLGKTATEVVQYADDILGMSLVTAQTGPSGRTVSKILLEEGVSIARELYLSILV 113
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+R I+A GGM+IE VA TP + + +
Sbjct: 114 DRERACITIIACQDGGMNIEEVAASTPERIGKIHI 148
>UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=16;
Gammaproteobacteria|Rep: Succinyl-CoA synthetase beta
chain - Haemophilus influenzae
Length = 389
Score = 90.2 bits (214), Expect = 5e-17
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTN-ALSGFKADEYVVKAQILAGGRGKGHFD 496
+NL E+ +K L Y + +++ + S D + L+ ++ K Q+ AGGRGK
Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGGKWAAKCQVHAGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV L ++ ++ A+ +G +L+T QT K G VN++ E+ +I +E Y S V
Sbjct: 58 ----GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAV 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
++R+ +AS GGM+IE V + +PHL+ V +
Sbjct: 114 VDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTI 149
>UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=14;
Campylobacter|Rep: Succinyl-CoA synthetase beta chain -
Campylobacter jejuni
Length = 387
Score = 89.0 bits (211), Expect = 1e-16
Identities = 48/114 (42%), Positives = 66/114 (57%)
Frame = +2
Query: 443 YVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNK 622
+ VKAQI AGGRG G GGV + KN D++ D A ++G L+T QT EG LV K
Sbjct: 43 WAVKAQIHAGGRGLG-------GGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQK 95
Query: 623 VMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+ + NI +E Y +I+ R I+AS GGMDIE VA+++P + V +
Sbjct: 96 LYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGI 149
>UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=21;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 388
Score = 88.2 bits (209), Expect = 2e-16
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRI-IDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
+N+ E+ K++ R V++ + R+ ++ + YVVKAQI AGGRGK
Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDTEIYVVKAQIHAGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV + K+ ++ A ++G +L+T QT EG V ++ + + +I++E Y V
Sbjct: 58 ----GGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFV 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
++R+ + ++AS GG +IE VA KTP +
Sbjct: 114 IDRATDRITLMASEEGGTEIEEVAAKTPEKI 144
>UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Deinococcus radiodurans
Length = 386
Score = 83.8 bits (198), Expect = 4e-15
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ K++LR + V++QD ++ + + A+ VVKAQ+ GGRGK
Sbjct: 1 MKLHEYQGKEVLRDFGVNVQDGKVATTPEEVQAIYKEYGQPVVVKAQVHVGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIK--RETYFSI 673
GGV + N DK ++ AKN++G + +G+ VNKV+V ++V+I E Y +
Sbjct: 57 ---GGVKYSANEDKALENAKNILGMDI-------KGLTVNKVLVTKAVDIDAGTEYYVGM 106
Query: 674 VMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+++R+ ++AS GGM+IE VA P +
Sbjct: 107 IVDRNVQSYTLMASAEGGMEIEEVAATNPEKI 138
>UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit,
putative; n=5; Trichocomaceae|Rep: Succinyl-CoA
synthetase beta subunit, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 407
Score = 83.4 bits (197), Expect = 6e-15
Identities = 38/103 (36%), Positives = 65/103 (63%)
Frame = +2
Query: 446 VVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKV 625
V+K+QILAGGRGKG + KGG+ + ++ A M+G+ L T+QTP G+LV K+
Sbjct: 60 VLKSQILAGGRGKGKMSSDGKGGIRIVATPEQAFQNASRMLGHYLATQQTPPHGLLVKKL 119
Query: 626 MVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEK 754
+ ++V++++E Y ++ +R I+ S GG++IE+ +K
Sbjct: 120 YIYKAVDVEQEFYLALTFDRERYSPVILISDQGGVNIESNQDK 162
>UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Euryarchaeota|Rep: Succinyl-CoA synthetase beta chain -
Methanococcus jannaschii
Length = 364
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/150 (30%), Positives = 84/150 (56%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K++ +KY + + + ++ + D N+++ K E V+KAQ+L GGRGK
Sbjct: 1 MKLHEYEAKNIFKKYGIPVPESFLVSKEDDLNSINVDK--EVVLKAQVLVGGRGKA---- 54
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ N+++ + A+ + ++ +G V K++V E + I++E Y SI++
Sbjct: 55 ---GGILFASNKEEFIKKAEELFNKEV-------KGEKVEKILVEEKLPIEKEYYVSIII 104
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+R I+ S GG+DIE VAEK P +
Sbjct: 105 DRDAKKPLIIFSTEGGVDIEEVAEKNPEKI 134
>UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Candidatus Vesicomyosocius okutanii HA|Rep: Succinyl-CoA
synthetase beta subunit - Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA)
Length = 386
Score = 80.6 bits (190), Expect = 4e-14
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLR-KYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
+++ E+ +K L K+ + + I ++A +VVKAQI AGGRGKG
Sbjct: 1 MHIHEYQAKTLFNHKHIQTPKGILIYSVDQASDACKTLGGSIWVVKAQIHAGGRGKG--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GG+ L ++ +++ + ++ ++LIT QT +G+ V+++++ NI E Y ++
Sbjct: 58 ----GGIILCRSIEEVKNACSQLLNSQLITPQTYAKGLPVSQLLIEIGENITHEFYLGLL 113
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
++R ++AS GGMDIE VA KTP+ +
Sbjct: 114 IDRQTKKITVLASTKGGMDIEKVARKTPNQI 144
>UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8;
Thermoprotei|Rep: Succinyl-CoA synthetase beta chain -
Pyrobaculum aerophilum
Length = 382
Score = 80.6 bits (190), Expect = 4e-14
Identities = 46/155 (29%), Positives = 84/155 (54%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K+L KY V I ++ + + ++ V+KAQ++ GRGK
Sbjct: 1 MKLHEYEAKELFSKYGVKIPPGKVALTPEEVLKIAREIGAPVVLKAQVVVAGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ + + ++ +L+K M G + +G++V K+ V + V ++RE Y S+++
Sbjct: 57 ---GGIKVANSPEEAYELSKRMFGMNI-------KGLIVKKLYVTKFVEVEREMYLSLII 106
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+R+ +ASP GGMDIE +A+ +P +K V V
Sbjct: 107 DRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYV 141
>UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2;
Candidatus Blochmannia|Rep: Succinyl-CoA synthetase beta
chain - Blochmannia floridanus
Length = 399
Score = 78.6 bits (185), Expect = 2e-13
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGF--KADEYVVKAQILAGGRGKGH 490
+NL E+ +K L +++ + I II + + +S + ++VK QI +GGRGK
Sbjct: 1 MNLYEYQAKQLFKQFNIPILKNHIITETSEIKDCISEIIKEGPPWIVKCQIRSGGRGKS- 59
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
GGV + + + ++ A G L+T QT +G VN +++ +VNI E Y S
Sbjct: 60 ------GGVQIVNSMEDMLAFANRWFGKNLVTYQTTVDGERVNSILIEPAVNIAHEFYLS 113
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKT 757
I+++R + + S GG+DIE V ++
Sbjct: 114 ILIDRDLSNIICIVSTKGGVDIENVIHES 142
>UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chain;
n=5; Escherichia coli|Rep: SucC, succinyl-CoA synthetase
beta chain - Escherichia coli (strain UTI89 / UPEC)
Length = 389
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +2
Query: 446 VVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKV 625
V+KAQ+ AGGRGK GGV + K + + M+G++L+T QT EG V+ +
Sbjct: 46 VLKAQVHAGGRGKA-------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTGPEGQYVSSI 98
Query: 626 MVAESVN-IKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
++ E++ +++E YF +V++R + SP GG++IE VA +TP + +V +
Sbjct: 99 LLCENIYPVRQELYFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSI 152
>UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n=3;
Archaeoglobus fulgidus|Rep: Succinyl-CoA synthetase beta
chain 1 - Archaeoglobus fulgidus
Length = 382
Score = 74.1 bits (174), Expect = 4e-12
Identities = 44/153 (28%), Positives = 77/153 (50%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L EH +K + K+ + + + S + ++ VVKAQIL GGRGK
Sbjct: 1 MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGRVVVKAQILVGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GGV + ++ ++AK ++G + +G V KV+V E +N+++E Y V+
Sbjct: 57 ---GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYVGYVV 106
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTV 778
++S ++ S GGMD+E +A K P + +
Sbjct: 107 DKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRI 139
>UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit
family protein; n=2; cellular organisms|Rep:
Succinyl-CoA synthetase, beta subunit family protein -
Tetrahymena thermophila SB210
Length = 534
Score = 73.7 bits (173), Expect = 5e-12
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 410 TNALSGFKADEYVVKAQILAGGRGKGHF-DNGFKGGVHLTKNRDKIVDLAKNMIGNKLIT 586
TN G ++VVKAQI AGGRGKG F +NG + GV + ++ D+A+ M+G LIT
Sbjct: 123 TNQSQGITFTDFVVKAQIHAGGRGKGFFKENGMQSGVQFATSPQEVKDIAEKMLGKTLIT 182
Query: 587 KQTPKEGILVNKVMVAESVNIKRETYF 667
KQT G VN V+V E +++ F
Sbjct: 183 KQTGLRGRSVNSVLVVERTFLRKVICF 209
>UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n=6;
Thermoplasmatales|Rep: Succinyl-CoA synthetase beta
subunit - Thermoplasma volcanium
Length = 384
Score = 73.3 bits (172), Expect = 6e-12
Identities = 47/144 (32%), Positives = 74/144 (51%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
LNL E+ KD+ R+Y + + + ++ S D + + VK+QIL GGRGK
Sbjct: 20 LNLYEYMGKDIFREYGIPVPNGYVVSSPQDVKKFT----NPVAVKSQILLGGRGKA---- 71
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ K +++ KN + L TK + V KV++ + +NIK E Y SI +
Sbjct: 72 ---GGIKFAKTDEEL----KNAVSTLLSTKV---RNMTVTKVLIEDMLNIKHEYYVSIAL 121
Query: 680 ERSFNGAAIVASPAGGMDIEAVAE 751
R+ ++AS GGM+IE V +
Sbjct: 122 NRAAKSPMLIASAMGGMEIENVPD 145
>UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: Succinyl
CoA ligase beta subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 172
Score = 72.5 bits (170), Expect = 1e-11
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADE-YVVKAQILAGGRGKGHFD 496
+NL E+ +K L Y + + + + + S D A + E ++VK Q GGRGK
Sbjct: 1 MNLHEYQAKKLFADYGIPVPEGKTVSSPSDARAAAQELGGEVWLVKTQAHTGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV L K+ D++ A+ ++G L+TKQT EG+ VN V+V + +I RE Y +
Sbjct: 58 ----GGVTLAKSLDEVEAAAEAILGMTLVTKQTGPEGLPVNLVLVEQGSDIARELYLGAL 113
Query: 677 MERS 688
++R+
Sbjct: 114 LDRA 117
>UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), beta
chain; n=3; Methanococcus maripaludis|Rep: Succinate-CoA
ligase (ADP-forming), beta chain - Methanococcus
maripaludis
Length = 362
Score = 71.7 bits (168), Expect = 2e-11
Identities = 44/150 (29%), Positives = 78/150 (52%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K++ ++ + I +++ K+++ V+KAQ+L GGRGK
Sbjct: 1 MKLHEYEAKEIFKENNIPIPKNKLVSGKVESIDYP------VVIKAQVLVGGRGKA---- 50
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ N D + +++IGN + +G LV KV++ E + I +E Y +V+
Sbjct: 51 ---GGILFADNVDDANEKIESLIGNTV-------KGELVEKVLLEEQIKIVKEYYVGVVV 100
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
R+ ++ S GG+DIE VA KTP +
Sbjct: 101 NRNEKNNVVIFSTEGGVDIEEVASKTPEKI 130
>UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Methanomicrobiales|Rep: Succinyl-CoA synthetase,
beta subunit - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 361
Score = 71.3 bits (167), Expect = 3e-11
Identities = 45/155 (29%), Positives = 84/155 (54%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ +E+ +K + R+ + + + +I S + NA A++ V+KAQ+ GGRGK
Sbjct: 1 MKFREYEAKQIFREAGIPVPNSVLITSADEANAAQKKVAEKVVLKAQVDVGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ L N + I D+A+++ + +G+ V K++V E++ I E Y SI +
Sbjct: 57 ---GGI-LPANAENISDVARDLFAKTI-------KGLPVEKILVEEALEISHEYYLSITI 105
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+R+ I+ S GG++IE +A++ P ++ V V
Sbjct: 106 DRAKKMPLILFSSEGGVEIETLAKERPEALRRVYV 140
>UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Roseovarius|Rep: Succinyl-CoA synthetase beta subunit -
Roseovarius sp. 217
Length = 391
Score = 70.9 bits (166), Expect = 3e-11
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = +2
Query: 326 LQEHHSKDLLRKYQVSIQDFRIIDSKLDTNAL-SGFKADEYVVKAQILAGGRGKGHFDNG 502
L E+ SK+LL +Y V + + R + + L A +YVVKAQI AGGRG
Sbjct: 3 LAEYQSKELLAQYGVHVPEGRPARTPDEAQRLCKEIDARKYVVKAQIGAGGRG------- 55
Query: 503 FKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVME 682
GG+ + D A+ ++G+ L+T QT G V V + +++I + + +I ++
Sbjct: 56 LAGGIRFAATPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFVAIALD 115
Query: 683 RSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
++AS AGG++ E A ++ P+
Sbjct: 116 PETGQPMLLASGAGGVEFEQRARMDEDTAQSCPL 149
>UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5;
Bacteroides|Rep: Succinyl-CoA synthetase beta chain -
Bacteroides fragilis
Length = 382
Score = 67.3 bits (157), Expect = 4e-10
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFD 496
+ + E+ +K++ Y + ++ + + A + +KAQ+L GGRGK
Sbjct: 1 MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV L N + A+ ++ + T K G V K++++E+VNI E Y S
Sbjct: 58 ----GGVKLANNDRDVYQYAQTIL------EMTIK-GYPVTKILLSEAVNIAAEYYISFT 106
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
++R+ ++ S AGGMDIE VA ++P +
Sbjct: 107 IDRNTRSVTLIMSAAGGMDIEEVARQSPEKI 137
>UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Vibrio cholerae NCTC 8457|Rep: Succinyl-CoA synthetase
beta chain - Vibrio cholerae NCTC 8457
Length = 148
Score = 67.3 bits (157), Expect = 4e-10
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGHFD 496
+NL E+ +K L ++ + + + D+ + +G + VVK Q+ AGGRGK
Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
GGV L ++ + A+ +G L+T QT G V+K++V E+ NI E Y V
Sbjct: 58 ----GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAV 113
Query: 677 MERSFNGAAIVAS 715
++RS +AS
Sbjct: 114 VDRSTRRIVFMAS 126
>UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 398
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/105 (33%), Positives = 60/105 (57%)
Frame = +2
Query: 446 VVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKV 625
V+K+QI AGGRGK GG+ ++ A +++G++L+T QT G VN +
Sbjct: 53 VLKSQIKAGGRGKA-------GGIRTANTLEEAGLQAIDLLGSRLVTAQTGPAGEQVNSL 105
Query: 626 MVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTP 760
++ E ++ +RE Y I+++R A++ S GG+DIE + + P
Sbjct: 106 LLEERIDHERELYVGILVDRETGRPALLVSGEGGVDIEKLGREAP 150
>UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Caldivirga maquilingensis IC-167|Rep: Succinyl-CoA
synthetase, beta subunit - Caldivirga maquilingensis
IC-167
Length = 377
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/150 (32%), Positives = 77/150 (51%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ K++L KY VS+ +I S D + S K +V K+Q+ GR K
Sbjct: 1 MRLLEYKGKEILAKYGVSVPKGVVISSVSDIDK-SNLKYPVFV-KSQVPFAGRAK----- 53
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
G V N+D+ +A +G K+I + V KV++ E V++ +E Y S+ +
Sbjct: 54 --MGLVKRANNKDEAKQIASEYLG-KVI------QDFEVKKVLLEEGVDVVKEYYVSVTI 104
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+RS I+ASP GG+DIE +A +P +
Sbjct: 105 DRSSRTFIILASPEGGVDIEEIARTSPEKI 134
>UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Halobacteriaceae|Rep: Succinyl-CoA synthetase beta chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 382
Score = 64.1 bits (149), Expect = 4e-09
Identities = 41/147 (27%), Positives = 74/147 (50%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K++ + + + S + ++ VKAQ+ GGRGK
Sbjct: 1 MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYPVAVKAQVHVGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ L +N + + A++++G L +G V++V+V E+V+ E Y + M
Sbjct: 57 ---GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYVGVTM 106
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTP 760
+RS ++ S GG+DIE+VAE+ P
Sbjct: 107 DRSEGAPVVMVSERGGVDIESVAEEAP 133
>UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Succinyl-CoA
synthetase, beta subunit - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 383
Score = 63.3 bits (147), Expect = 7e-09
Identities = 39/147 (26%), Positives = 74/147 (50%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
++L EH K+LL ++ + + + + + VKAQ+L GGRGK
Sbjct: 1 MDLYEHQGKELLGRFGLRTLPGVVATTPEEARRAAERLGGTVAVKAQVLTGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ + ++ ++ + A+ ++G + G V ++++ +I+RE Y S ++
Sbjct: 57 ---GGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLIESGADIERELYLSAMV 106
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTP 760
+R I+ S GG+DIE VAE++P
Sbjct: 107 DRESRRPLILFSTEGGVDIEEVAERSP 133
>UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=47;
Actinobacteria (class)|Rep: Succinyl-CoA synthetase beta
chain - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 398
Score = 62.5 bits (145), Expect = 1e-08
Identities = 45/155 (29%), Positives = 75/155 (48%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
++L E+ ++DL + V + + + + VVKAQ+ GGRGK
Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGGLTVVKAQVKVGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GGV + + D A ++G + +G VN+VMVA+ +I E YFSI++
Sbjct: 57 ---GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSILL 106
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+R+ + S GGM+IE +A++ P + V V
Sbjct: 107 DRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEV 141
>UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 390
Score = 58.4 bits (135), Expect = 2e-07
Identities = 40/148 (27%), Positives = 69/148 (46%)
Frame = +2
Query: 326 LQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDNGF 505
L E+ +K++ KY + + I + + + VVKAQ++AGGRGK
Sbjct: 3 LYEYEAKEVFSKYGIPLGQNGIATNPAEAGMICAGIGKPVVVKAQVMAGGRGKA------ 56
Query: 506 KGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMER 685
G + + + A ++G + G V K+++ E + I RE Y SI M+
Sbjct: 57 -GLILPAADPEAAAKAAAQILGKE-------HHGEQVKKLLIEEQIEIAREVYASITMDF 108
Query: 686 SFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+ ++ S GGM+IE++A P L+
Sbjct: 109 TEGKPVMMVSAQGGMEIESLAAANPELL 136
>UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 380
Score = 56.8 bits (131), Expect = 6e-07
Identities = 37/155 (23%), Positives = 74/155 (47%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ + D+ + + + + + + ++G ++KAQ+L GGRG
Sbjct: 1 MRLHEYEALDIFERNGIPVPRRGVASTMHEALRVAGEIGYPVILKAQVLVGGRG------ 54
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ + D++ ++A+ ++ + + +G+ V K++V E V + +E Y I +
Sbjct: 55 -LAGGIKTASSPDELKEVAEALLSSDV-------KGLPVLKLLVCEKVEVAKELYVGITI 106
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+ IVAS GGM IE A +P + + V
Sbjct: 107 DGYSGKPVIVASTEGGMLIEETARTSPEKIAAIHV 141
>UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Archaea|Rep: Succinyl-CoA synthetase beta subunit -
Methanopyrus kandleri
Length = 359
Score = 56.8 bits (131), Expect = 6e-07
Identities = 39/145 (26%), Positives = 70/145 (48%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K LL++ V I + + + D ++ VKAQ+ G RGK
Sbjct: 2 IRLLEYQAKHLLKEAGVPIPEGDVARTSADAARIAAELGGPVAVKAQVPVGARGKA---- 57
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ + + A+ ++G+++ G V KV+V E ++I E Y SI +
Sbjct: 58 ---GGILFADDPEGARKAARKLLGSRI-------RGETVRKVLVEEKLDIAEEWYVSITL 107
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEK 754
+R+ ++ S GG+DIE V ++
Sbjct: 108 DRAKRRPVLLVSREGGVDIEEVPDE 132
>UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05557 protein - Schistosoma
japonicum (Blood fluke)
Length = 177
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +2
Query: 563 MIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEA 742
M+G+++ T QT G L N ++ E +RE Y +IV++RS G +V GG++IE
Sbjct: 1 MLGHRIFTAQTGDSGQLCNTLLACERKYSRREHYLAIVLDRSSGGPVMVGCKQGGVNIED 60
Query: 743 VAEKTPHLVKTVPVXI 790
+A P + +P+ I
Sbjct: 61 IARDNPDALIKIPIDI 76
>UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Symbiobacterium thermophilum|Rep: Succinyl-CoA
synthetase beta subunit - Symbiobacterium thermophilum
Length = 373
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/99 (32%), Positives = 55/99 (55%)
Frame = +2
Query: 449 VKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVM 628
+KAQ+L GGRGK GG+ L ++ + A+ ++G L +G +V+KV+
Sbjct: 43 IKAQVLVGGRGKA-------GGIKLANTPEEARERAREILGMNL-------KGYIVDKVL 88
Query: 629 VAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAV 745
V + I++E Y SI ++ ++AS GG++IE+V
Sbjct: 89 VDPQIKIEKEYYVSITLDGMAKKPLVMASEYGGVEIESV 127
>UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Succinate--CoA ligase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 368
Score = 52.0 bits (119), Expect = 2e-05
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFK-ADE----YVVKAQILAGGRGK 484
+ L E +K+L R+Y +++ +DS TN G K A E +V+K Q+ GGRGK
Sbjct: 1 MQLLEFQAKELFREYGINL-----LDSISSTNIEEGRKHAKELGYPFVIKIQVPVGGRGK 55
Query: 485 GHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETY 664
GG+ +N D+ ++ L K IL+ K+ +IK+E Y
Sbjct: 56 A-------GGIQKCQNDDEFEIKYPQVMD--LTIKGEKARAILLEKM-----ADIKKELY 101
Query: 665 FSIVMERSFNGAAIVASPAGGMDIEAV 745
SI + RS I+AS GG++IE+V
Sbjct: 102 LSIFLNRSKRCYTIIASDEGGVEIESV 128
>UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n=4;
Peptococcaceae|Rep: Succinyl-CoA synthetase beta subunit
- Pelotomaculum thermopropionicum
Length = 369
Score = 51.6 bits (118), Expect = 2e-05
Identities = 37/141 (26%), Positives = 66/141 (46%)
Frame = +2
Query: 332 EHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDNGFKG 511
E+ K+L KY + + R+ + + ++ VVK+Q+L G RGK G
Sbjct: 3 EYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIGGPCVVKSQVLIGKRGKA-------G 55
Query: 512 GVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSF 691
G+ + ++ A+ + + +G+ V V+V E + I +E Y SI ++ +
Sbjct: 56 GIKFPNSPEEAKKAAEEVFAMTI-------QGLPVEAVLVEEKLKIDKELYMSITVDGAA 108
Query: 692 NGAAIVASPAGGMDIEAVAEK 754
++AS GGMDIE E+
Sbjct: 109 KMPVLIASAYGGMDIEEQPEE 129
>UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase beta subunit - Aquifex
aeolicus
Length = 436
Score = 50.4 bits (115), Expect = 5e-05
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Frame = +2
Query: 320 LNLQEHHSKD-LLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFD 496
++L E+ + D + +KY + + ++ D + E VVK+Q+L G RGK
Sbjct: 1 MDLYEYEAYDKIFKKYGIPTPKYMFVEHITDDVVEFVNQLGECVVKSQVLVGKRGKA--- 57
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIV 676
G V + N D+ ++ + ++ + G + V+V E NI +E Y SIV
Sbjct: 58 ----GAVRVCSNPDEALEEIETLLRMTVY-------GEMPVGVLVVEKANILKELYASIV 106
Query: 677 MERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPV 784
+ S GGMDIE E P VK+ P+
Sbjct: 107 YSTDHRAPVLTLSLEGGMDIE---EVPPDKVKSWPI 139
>UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho
melanesiensis BI429|Rep: Succinate--CoA ligase -
Thermosipho melanesiensis BI429
Length = 338
Score = 50.4 bits (115), Expect = 5e-05
Identities = 44/145 (30%), Positives = 73/145 (50%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ + E K L +++ V I + ++ SK D + A V+K+Q+L GGR K
Sbjct: 1 MKIYEFVGKQLFKEHGVKIPEGYLVTSK-DELTIKFLPA---VLKSQVLVGGRMKA---- 52
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
GG+ N+ + D N++ K I + P GIL+ K+ +NIKRE Y S+ +
Sbjct: 53 ---GGILFANNQREFYDYG-NILLKKNIKGEKPY-GILIEKM-----INIKREYYLSMYI 102
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEK 754
++ I+ S GG++IE A+K
Sbjct: 103 DKLEKDFMILFSEYGGINIEENADK 127
>UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Succinate--CoA
ligase - Fervidobacterium nodosum Rt17-B1
Length = 355
Score = 50.0 bits (114), Expect = 7e-05
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSI-QDFRIIDSKLDTNALSGFKAD---EYVVKAQILAGGRGKG 487
+ +QE+ K LL ++ + + + + +D+ L+ + V+K+Q+L GGR K
Sbjct: 1 MKIQEYVGKRLLSEHGFYVPRSLFVKEEDIDSKELTQKILELGFPQVLKSQVLVGGRMKA 60
Query: 488 HFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYF 667
GGV + KN ++ + + ++ NK I + P EG+L+ E V +E YF
Sbjct: 61 -------GGVIIAKNLEESMRALRELV-NKEIKGEMP-EGVLIE-----EFVKHDKELYF 106
Query: 668 SIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
I ++R+ ++ S GG+DIE + P+ V
Sbjct: 107 GITIDRTNRNILMIYSEFGGVDIEEASRMFPNKV 140
>UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=3; Clostridia|Rep:
ATP-dependent carboxylate-amine ligase-like, ATP-grasp -
Desulfitobacterium hafniense (strain DCB-2)
Length = 425
Score = 48.4 bits (110), Expect = 2e-04
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Frame = +2
Query: 332 EHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDNGFKG 511
E+ K+ L K + + R + + + + VK Q+ AGGRGK G
Sbjct: 6 EYQGKEWLAKAGMPVPKGRPASTPEEAREAAEWIGGPVAVKGQVQAGGRGKA-------G 58
Query: 512 GVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVME--R 685
V L D+ A ++ + +G+ V KV+V E ++IK+E Y S V+ +
Sbjct: 59 IVKLVNTPDEAAAAAAEILSKTV-------KGLPVRKVLVEEKLDIKKEFYCSFVVNGAK 111
Query: 686 SFNGAAIVASPAGGMDIEAVAE 751
++ S GGMDIE+V E
Sbjct: 112 EARSPMLMFSVEGGMDIESVPE 133
>UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 372
Score = 48.0 bits (109), Expect = 3e-04
Identities = 41/150 (27%), Positives = 72/150 (48%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEYVVKAQILAGGRGKGHFDN 499
+ L E+ +K+L + + I +I + N+ V+KAQ+L GGRGK
Sbjct: 1 MKLFEYQAKELFAESGIPIPQNALIGDISELNSALEKIGLPCVLKAQVLQGGRGKA---- 56
Query: 500 GFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVM 679
G V + +++ A+ ++ + T K K++V E+V +RE Y SI +
Sbjct: 57 ---GLVKFVRTKEEAQKEAERIL------EATGK------KLLVEEAVPYEREMYVSITV 101
Query: 680 ERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
+ + A ++A GG+DIE +A TP +
Sbjct: 102 DAASGLAMVMACLEGGVDIEQIARTTPEKI 131
>UniRef50_A1RXJ2 Cluster: Transcriptional regulator, Fis family;
n=1; Thermofilum pendens Hrk 5|Rep: Transcriptional
regulator, Fis family - Thermofilum pendens (strain Hrk
5)
Length = 372
Score = 46.8 bits (106), Expect = 6e-04
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Frame = +2
Query: 332 EHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKA--DEYVVKAQILAGGRGKGHFDNGF 505
E KD+ K+QV ++ ++ + ++L K +VKAQ+ GRGK
Sbjct: 5 EFEVKDIFEKFQVPVEKSCLLTHEALKDSLGCIKGLRTPLIVKAQVRGWGRGKA------ 58
Query: 506 KGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMER 685
G V +N ++ + +A+ + G + V+V+E I RE Y S ++
Sbjct: 59 -GLVKSAENPEEALKVAQEFFLREF-------NGEKIRYVLVSERKRILREMYLSFMVSS 110
Query: 686 SFNGAAIVASPAGGMDIEAVAEKTP 760
+ G ++AS GG+D+E ++ KTP
Sbjct: 111 NPPGFLLLASKHGGVDVEELS-KTP 134
>UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
beta subunit - Cenarchaeum symbiosum
Length = 365
Score = 45.2 bits (102), Expect = 0.002
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +2
Query: 332 EHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKADEY--VVKAQILAGGRGKGHFDNGF 505
E+ +K+L +Y + + R SK A K Y V+K Q+ GGRGK
Sbjct: 2 EYQAKELFAEYGIKVPQGRA--SKGIEQARKDAKDIGYPFVIKIQVPVGGRGKA------ 53
Query: 506 KGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMER 685
GG+ N D++V L + + I +G +++ + +I +E Y S+ + R
Sbjct: 54 -GGIQKCTNEDELV-LRYPQVYDLTI------KGERARAILLEKMADISKELYLSLFLNR 105
Query: 686 SFNGAAIVASPAGGMDIEAV 745
S ++AS GG++IE+V
Sbjct: 106 SKRCYTVIASAEGGVEIESV 125
>UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11;
Chlorobiaceae|Rep: Citrate lyase, subunit1 - Chlorobium
tepidum
Length = 398
Score = 40.3 bits (90), Expect = 0.054
Identities = 34/103 (33%), Positives = 53/103 (51%)
Frame = +2
Query: 431 KADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGI 610
+ + VVKA GGR K G V + N D+ + ++ M+G K+ T +
Sbjct: 43 RESKLVVKAHEAIGGRFK-------LGLVKIGLNLDEAIQASREMLGAKVGTAE------ 89
Query: 611 LVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIE 739
V +V+VAE ++ E Y SI+ R +GA ++ S GG+DIE
Sbjct: 90 -VRQVIVAEMLDHDAEFYVSIIGNR--DGAELLISKYGGVDIE 129
>UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3;
Chroococcales|Rep: Succinate--CoA ligase - Synechocystis
sp. (strain PCC 6803)
Length = 401
Score = 38.7 bits (86), Expect = 0.17
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +2
Query: 320 LNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSGFKAD-EYVVKAQILAGGRGKGHFD 496
++L E+ +K+L ++ + I + I + T AL + V+K+Q+ AGGRGK
Sbjct: 1 MDLLEYQAKELFQQVGIPILPSQTIQN---TTALKRLQIPYPMVLKSQVRAGGRGKA--- 54
Query: 497 NGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAES-VNIKRETYFSI 673
GGV +N + A + I + I + P+ V++AE+ + + E + +I
Sbjct: 55 ----GGVRFVENTIDAI-AAASAIFHLPIADEYPE-------VILAEARYDAQSELFLAI 102
Query: 674 VMERSFNGAAIVASPAGGMDIEAVAEK 754
V++ ++ S GG+D+E + E+
Sbjct: 103 VLDYQRQCPVLMGSSEGGIDVETLLEQ 129
>UniRef50_Q6NDJ4 Cluster: DUF81 precursor; n=2; Rhodopseudomonas
palustris|Rep: DUF81 precursor - Rhodopseudomonas
palustris
Length = 262
Score = 37.5 bits (83), Expect = 0.38
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = -3
Query: 783 TGTVFTKCGVFSATASISIPPAGEATMAAPLKLLSITILKYVSLLIFTLSATITLFTKIP 604
T V CG+F+ A++ PPA M+ P + +++ SLL+F L+ +I FT I
Sbjct: 144 TTAVGMLCGLFNGLAAMPSPPAIVYYMSGPFRAVAVR----ASLLVFFLATSIAGFTSIA 199
Query: 603 SLGVCLV 583
+G+ V
Sbjct: 200 LVGLATV 206
>UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n=1;
unknown|Rep: UPI00015B9071 UniRef100 entry - unknown
Length = 384
Score = 35.5 bits (78), Expect = 1.5
Identities = 27/109 (24%), Positives = 51/109 (46%)
Frame = +2
Query: 446 VVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKV 625
+VKAQ+ G RGK GG+ ++ +A+ ++G + + V V
Sbjct: 43 MVKAQVPTGKRGKA-------GGIKPANAAEEARGVAERILGMTI-------DCHAVGAV 88
Query: 626 MVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVK 772
++ + I E Y +++++ + ++ S GGMDIE VA P ++
Sbjct: 89 LLEQQATIASEFYAAVLIDTASRCPLVLFSTEGGMDIEEVAATRPDALR 137
>UniRef50_Q4YZZ3 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 157
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 365 QVSIQDFRIIDSKLDTNALS-GFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDK 541
++SI DF + D N +S EY+ +I+ G +F+N + + +DK
Sbjct: 29 KISISDFNYYN---DVNDISVSLLETEYISILKIIGDGTTNTNFENSYDYLIS-DDEQDK 84
Query: 542 IVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIK 652
++ N +GN +I K + ILV K V + K
Sbjct: 85 TCNVIHNKLGNVIIKKNIDSDIILVQKTNVKTYIKDK 121
>UniRef50_A6DBG6 Cluster: Sensor protein; n=1; Caminibacter
mediatlanticus TB-2|Rep: Sensor protein - Caminibacter
mediatlanticus TB-2
Length = 1023
Score = 34.7 bits (76), Expect = 2.7
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 539 KIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSI 673
KI ++ N+I N + K TP+ GI+ K+++ E +N K + YF +
Sbjct: 506 KIKEIITNLINNAI--KFTPENGIISVKILLQEIINNKAKIYFEV 548
>UniRef50_UPI0000F2AFED Cluster: PREDICTED: similar to seven
transmembrane helix receptor; n=2; Theria|Rep:
PREDICTED: similar to seven transmembrane helix receptor
- Monodelphis domestica
Length = 418
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = -3
Query: 660 VSLLIFTLSATITLFTKIPSLGVCLVISLFPIIFLAKSTILSRFFVR*TPPLNPL 496
+S + TLSA IT+ T G C+ I +P + + ILS F+ TP LNP+
Sbjct: 293 LSKALSTLSAHITVVTLF--FGPCIFIYAWPFSNFSGTKILSVFYTVITPLLNPI 345
>UniRef50_Q6HGL7 Cluster: Possible carbamoyl-phosphate synthase
large chain; n=3; Bacillus cereus group|Rep: Possible
carbamoyl-phosphate synthase large chain - Bacillus
thuringiensis subsp. konkukian
Length = 431
Score = 33.1 bits (72), Expect = 8.2
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +2
Query: 341 SKDLLRKYQVSIQDFRIIDSKL--DTNALSGF--KADEYVVKAQILAGGRGKGHFDNGFK 508
+KD++R+ +DF I DS + +T ++ F K D ++K I AGG+G D+G
Sbjct: 120 NKDMMREILAG-KDFSI-DSTVCNNTEDINEFLNKKDSVIIKPPIGAGGKGVCKLDSGDD 177
Query: 509 GGVHLTKNRDKIVDLAKNMIGNKLI 583
GV + +N ++ L + I ++
Sbjct: 178 VGVFIEENGIQLPVLVEEYIAGDIV 202
>UniRef50_Q5NQR6 Cluster: Cardiolipin synthase; n=2; Zymomonas
mobilis|Rep: Cardiolipin synthase - Zymomonas mobilis
Length = 472
Score = 33.1 bits (72), Expect = 8.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 404 LDTNALSGFKADEYVVKA--QILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNK 577
L T AL G + D V K QIL K ++ G+H+ + RDK++ + NK
Sbjct: 340 LKTAALRGVRIDIIVSKIADQILVSMAQKSYYQELLSAGIHIHRYRDKLLHAKHISVDNK 399
Query: 578 L 580
L
Sbjct: 400 L 400
>UniRef50_Q040L5 Cluster: Predicted membrane protein; n=3;
Lactobacillus|Rep: Predicted membrane protein -
Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
Length = 307
Score = 33.1 bits (72), Expect = 8.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 780 GTVFTKCGVFSATASI--SIPPAGEATMAAPLKLLSITILKYVSLLIFTLSATITLFTKI 607
G VFT CGV TA + + PAG + L +++ + Y+ F A IT I
Sbjct: 174 GVVFTTCGVGKLTADMISHVFPAGNHFLGVALYCIAMALFTYIMGNAFAAFAVITAAIGI 233
Query: 606 P 604
P
Sbjct: 234 P 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,554,927
Number of Sequences: 1657284
Number of extensions: 12747468
Number of successful extensions: 30890
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 29814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30820
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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