Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A08
(791 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein. 171 3e-42
AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-C... 164 4e-40
BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase, G... 151 2e-36
BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase, G... 151 2e-36
BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein. 148 2e-35
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 125 2e-28
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 125 2e-28
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 125 2e-28
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 123 6e-28
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 123 6e-28
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 123 6e-28
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 123 6e-28
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 123 6e-28
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 116 1e-25
AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase, A... 112 1e-24
BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for IM... 98 3e-20
AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane hel... 31 3.6
AK027571-1|BAB55207.1| 409|Homo sapiens protein ( Homo sapiens ... 30 8.3
>BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein.
Length = 432
Score = 171 bits (415), Expect = 3e-42
Identities = 88/166 (53%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Frame = +2
Query: 275 LASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVV 451
LA+ + ++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+
Sbjct: 23 LAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVL 82
Query: 452 KAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMV 631
KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMV
Sbjct: 83 KAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMV 142
Query: 632 AESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
AE+++I RETY +I+M+RS NG +V SP GG+DIE VA P L+
Sbjct: 143 AEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELI 188
>AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 404
Score = 164 bits (398), Expect = 4e-40
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
Frame = +2
Query: 299 RVISTRHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGG 475
++ S R LNLQE+ SK L+ V +Q F + D+ + A A E V+KAQILAGG
Sbjct: 3 QLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGG 62
Query: 476 RGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKR 655
RGKG F++G KGGVHLTK+ + + LAK MIG L TKQTPKEG+ VNKVMVAE+++I R
Sbjct: 63 RGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISR 122
Query: 656 ETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
ETY +I+M+RS NG +V SP G DIE VA P L+
Sbjct: 123 ETYLAILMDRSCNGPVLVGSPQGRSDIEEVAASNPELI 160
>BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 151 bits (367), Expect = 2e-36
Identities = 76/135 (56%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
Frame = +2
Query: 368 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 544
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 545 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAG 724
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP G
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 725 GMDIEAVAEKTPHLV 769
G+DIE VA P L+
Sbjct: 126 GVDIEEVAASNPELI 140
>BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 151 bits (367), Expect = 2e-36
Identities = 76/135 (56%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
Frame = +2
Query: 368 VSIQDFRIIDSKLDT-NALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKI 544
V +Q F + D+ + A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + +
Sbjct: 6 VRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVV 65
Query: 545 VDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAG 724
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP G
Sbjct: 66 GQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQG 125
Query: 725 GMDIEAVAEKTPHLV 769
G+DIE VA P L+
Sbjct: 126 GVDIEEVAASNPELI 140
>BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein.
Length = 362
Score = 148 bits (359), Expect = 2e-35
Identities = 72/118 (61%), Positives = 88/118 (74%)
Frame = +2
Query: 416 ALSGFKADEYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQT 595
A A E V+KAQILAGGRGKG F++G KGGVHLTK+ + + LAK MIG L TKQT
Sbjct: 1 AAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQT 60
Query: 596 PKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLV 769
PKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP GG+DIE VA P L+
Sbjct: 61 PKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELI 118
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 125 bits (302), Expect = 2e-28
Identities = 66/160 (41%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA +TP V P+ I
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAVIKEPIDI 210
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 125 bits (301), Expect = 2e-28
Identities = 65/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA +TP + P+ I
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDI 188
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 125 bits (301), Expect = 2e-28
Identities = 65/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 14 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 73
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 74 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 133
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA +TP + P+ I
Sbjct: 134 ITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIIKEPIDI 173
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 123 bits (297), Expect = 6e-28
Identities = 64/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 60 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 119
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 120 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 179
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 180 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 219
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 123 bits (297), Expect = 6e-28
Identities = 64/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 210
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 123 bits (297), Expect = 6e-28
Identities = 64/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 29 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 88
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 89 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 148
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 149 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 188
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 123 bits (297), Expect = 6e-28
Identities = 64/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 210
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 123 bits (297), Expect = 6e-28
Identities = 64/160 (40%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +2
Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGH 490
R+L+L E+ S +LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGT 110
Query: 491 FDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFS 670
F++G KGGV + + ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+
Sbjct: 111 FESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFA 170
Query: 671 IVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 171 ITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 210
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 116 bits (278), Expect = 1e-25
Identities = 60/149 (40%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
Frame = +2
Query: 347 DLLRKYQVSIQDFRIIDSKLDTNALSG-FKADEYVVKAQILAGGRGKGHFDNGFKGGVHL 523
+LL++ VS+ + S + A++ + + V+KAQ+LAGGRGKG F++G KGGV +
Sbjct: 2 ELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKI 61
Query: 524 TKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAA 703
+ ++ ++ MIG KL TKQT ++G + N+V+V E +RE YF+I MERSF G
Sbjct: 62 VFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPV 121
Query: 704 IVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
++ S GG++IE VA +TP + P+ I
Sbjct: 122 LIGSSHGGVNIEDVAAETPEAIIKEPIDI 150
>AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 298
Score = 112 bits (270), Expect = 1e-24
Identities = 53/117 (45%), Positives = 79/117 (67%)
Frame = +2
Query: 440 EYVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVN 619
+ V+KAQ+LAGGRGKG F++G KGGV + + ++ ++ MIG KL TKQT ++G + N
Sbjct: 24 DVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICN 83
Query: 620 KVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
+V+V E +RE YF+I MERSF G ++ S GG++IE VA ++P + P+ I
Sbjct: 84 QVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDI 140
>BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for
IMAGE:4996134) protein.
Length = 321
Score = 98.3 bits (234), Expect = 3e-20
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = +2
Query: 551 LAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGM 730
LAK MIG L TKQTPKEG+ VNKVMVAE+++I RETY +I+M+RS NG +V SP GG+
Sbjct: 5 LAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGV 64
Query: 731 DIEAVAEKTPHLV 769
DIE VA P L+
Sbjct: 65 DIEEVAASNPELI 77
>AB065558-1|BAC05796.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 31.5 bits (68), Expect = 3.6
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -3
Query: 660 VSLLIFTLSATITLFTKIPSLGVCLVISLFPIIFLAKSTILSRFFVR*TPPLNP 499
+S + TLSA I + T G C+ I ++P LA + L+ F+ TP LNP
Sbjct: 233 LSKALSTLSAHIIVVTLF--FGPCIFIYVWPFSSLASNKTLAVFYTVITPLLNP 284
>AK027571-1|BAB55207.1| 409|Homo sapiens protein ( Homo sapiens
cDNA FLJ14665 fis, clone NT2RP2002891. ).
Length = 409
Score = 30.3 bits (65), Expect = 8.3
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = +2
Query: 551 LAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGM 730
LAKN G +I TP G N V VA+ N + SIV+E N I A +
Sbjct: 332 LAKNRKGIAIIIHGTPLSGKSANAVSVAKYYNAACLSIDSIVLEAVANSNNIPGIRACEL 391
Query: 731 DIEAVAEKT 757
I A E++
Sbjct: 392 CIRAAIEQS 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,332,655
Number of Sequences: 237096
Number of extensions: 1834063
Number of successful extensions: 2909
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2907
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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