Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_A08
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical pr...   171   5e-43
Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...   128   6e-30
AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical ...    29   2.9  
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>U41557-3|AAA83304.1|  415|Caenorhabditis elegans Hypothetical
           protein C50F7.4 protein.
          Length = 415

 Score =  171 bits (416), Expect = 5e-43
 Identities = 86/162 (53%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
 Frame = +2

Query: 314 RHLNLQEHHSKDLLRKYQVSIQDFRIIDSKLDTNAL-SGFKADEYVVKAQILAGGRGKGH 490
           R LNLQE  SK++L K+  S+Q+F +  ++ +       F   EYVVKAQILAGGRGKG 
Sbjct: 18  RFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVKAQILAGGRGKGK 77

Query: 491 FDNGFKG--GVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNKVMVAESVNIKRETY 664
           F NG KG  GV +TK +D  ++    MIG +L+TKQT  EG+ V+KVM+AE V+IKRETY
Sbjct: 78  FINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETY 137

Query: 665 FSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
            +++M+R  NG  +VASP GGMDIEAVAEKTP  +   P+ I
Sbjct: 138 LAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDI 179


>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score =  128 bits (308), Expect = 6e-30
 Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
 Frame = +2

Query: 266 LINLASSTYCPRVISTRHLNLQEHHSKDLLRKYQVSIQDFRII-DSKLDTNALSGFKADE 442
           L+N +     P   + R L L EHH   +L+ Y++ +  F +  D++   +        +
Sbjct: 9   LLNTSQKFMAP---AARTLMLHEHHGMKILQNYEIKVPPFGVAQDAETAFSEAKRIGGKD 65

Query: 443 YVVKAQILAGGRGKGHFDNGFKGGVHLTKNRDKIVDLAKNMIGNKLITKQTPKEGILVNK 622
           YVVKAQ+LAGGRGKG F +G +GGV +    D++   A  MIG  LITKQT   G    +
Sbjct: 66  YVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEE 125

Query: 623 VMVAESVNIKRETYFSIVMERSFNGAAIVASPAGGMDIEAVAEKTPHLVKTVPVXI 790
           VMV + +  +RE YFSI ++R+ NG  ++AS  GG++IE VA   P  +  +P+ +
Sbjct: 126 VMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDV 181


>AF067216-8|AAN84852.1|  954|Caenorhabditis elegans Hypothetical
           protein C35E7.5b protein.
          Length = 954

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 754 FFSHCLYIHTSSWRSYNGCTIKTSLHYNTKVCLSFDIHTFCDH 626
           F  +C +I      +YN      + +Y  K+  SF+ H  CDH
Sbjct: 736 FRVYCSHIKDVLINAYNSHAKSNAFYYYNKITGSFEEHVGCDH 778


>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
           protein C35E7.5a protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 754 FFSHCLYIHTSSWRSYNGCTIKTSLHYNTKVCLSFDIHTFCDH 626
           F  +C +I      +YN      + +Y  K+  SF+ H  CDH
Sbjct: 736 FRVYCSHIKDVLINAYNSHAKSNAFYYYNKITGSFEEHVGCDH 778


>Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical
           protein K04D7.6 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -3

Query: 675 TILKYVSLLIFTLSATITLFTKIPSLGVCLVISLFPIIF 559
           ++L YV L    L ++ TLF  IPS+ V L +S+  + F
Sbjct: 123 SVLLYVFLREKDLKSSWTLFYYIPSIAVSLFVSVLNVNF 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,170
Number of Sequences: 27780
Number of extensions: 314041
Number of successful extensions: 670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)