Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_A07
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81589-9|CAJ85769.1|  926|Caenorhabditis elegans Hypothetical pr...    54   8e-08
Z81589-8|CAB04720.1|  923|Caenorhabditis elegans Hypothetical pr...    54   8e-08
Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z92834-11|CAB07388.2|  594|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z68114-2|CAA92158.1|  463|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z81589-9|CAJ85769.1|  926|Caenorhabditis elegans Hypothetical
           protein T08G5.5b protein.
          Length = 926

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
 Frame = +1

Query: 232 MHEAYEVSHL-LNATVQIEAIAAFENN--LLLGTRQGHLLMYSLSTNNEEQKYQVHLLRY 402
           M++AY    + L   V++  +A  E+N  LL G R GHL  Y++S N         L   
Sbjct: 1   MYDAYTPCEVALRLPVEVTCLAFQESNQTLLAGGRAGHLYAYTISANRRG----FELTNI 56

Query: 403 RKNFSKKPIQQIEVIPDENLLLCLTDSTLATYNINGVNFPLIKTFEQTKGASLFA 567
            K+F KK + +++V   E+LLLC++D  L  + ++   + +     + K    FA
Sbjct: 57  CKSFHKKAVMELKVCQREDLLLCVSDGQLMAHKLSDPEYKVETLIHKVKPVQTFA 111


>Z81589-8|CAB04720.1|  923|Caenorhabditis elegans Hypothetical
           protein T08G5.5a protein.
          Length = 923

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
 Frame = +1

Query: 232 MHEAYEVSHL-LNATVQIEAIAAFENN--LLLGTRQGHLLMYSLSTNNEEQKYQVHLLRY 402
           M++AY    + L   V++  +A  E+N  LL G R GHL  Y++S N         L   
Sbjct: 1   MYDAYTPCEVALRLPVEVTCLAFQESNQTLLAGGRAGHLYAYTISANRRG----FELTNI 56

Query: 403 RKNFSKKPIQQIEVIPDENLLLCLTDSTLATYNINGVNFPLIKTFEQTKGASLFA 567
            K+F KK + +++V   E+LLLC++D  L  + ++   + +     + K    FA
Sbjct: 57  CKSFHKKAVMELKVCQREDLLLCVSDGQLMAHKLSDPEYKVETLIHKVKPVQTFA 111


>Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical
           protein M01F1.9 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 581 TLQSKANSEAPLVCSKVFINGKLTPLMLYVASVESVRH 468
           TL  KA      VC  +  NG  TP + Y A++E+  H
Sbjct: 210 TLPKKAYKLGDDVCGFLDFNGATTPCVQYSATIETEEH 247


>Z92834-11|CAB07388.2|  594|Caenorhabditis elegans Hypothetical
           protein F39B2.8 protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -3

Query: 181 TLHESESSHFVGNYDFVFIKILFFSKTHXKIAKSEFGAXTSGGEMMVDDMKLLDRP 14
           T   S SS +   Y  +FI  L +S  H           T GG+ + + +  LD+P
Sbjct: 5   TTTTSSSSSYTPWYHHIFIIFLQYSLFHISPTFGARNTVTEGGQPLTELLSSLDQP 60


>Z68114-2|CAA92158.1|  463|Caenorhabditis elegans Hypothetical
           protein F17A2.3 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 343 MYSLSTNNEEQKYQVHLLRYRKNFSKK-PIQQIEVIPDENLLLCLTDSTLATYNINGVNF 519
           ++S S+N   +  +VHLL  +   ++    ++  ++ D+N   C+ +++ A   +   + 
Sbjct: 303 VHSTSSNELSEPIEVHLLVDKSEVNRHIKSKEHPLLEDQNFTACIPEASPALVPLTTAST 362

Query: 520 PLIKTFEQTKGASL 561
           P   TF+  + A+L
Sbjct: 363 PQHLTFKLPQTAAL 376


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,478,272
Number of Sequences: 27780
Number of extensions: 302092
Number of successful extensions: 713
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)