Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A05
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducibl... 100 3e-21
AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein. 100 3e-21
AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducibl... 100 3e-21
AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein. 100 3e-21
AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein. 100 3e-21
CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein. 99 1e-20
AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein. 98 2e-20
AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducibl... 89 1e-17
BC071696-1|AAH71696.1| 498|Homo sapiens FLJ10404 protein protein. 34 0.32
AY330211-1|AAP92113.1| 605|Homo sapiens netrin 4 protein. 30 6.9
AF297711-1|AAG53651.1| 628|Homo sapiens netrin 4 precursor prot... 30 6.9
AF278532-1|AAG30822.1| 628|Homo sapiens beta-netrin protein. 30 6.9
>BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 100 bits (240), Expect = 3e-21
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein.
Length = 345
Score = 100 bits (240), Expect = 3e-21
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 100 bits (240), Expect = 3e-21
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein.
Length = 345
Score = 100 bits (240), Expect = 3e-21
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein.
Length = 345
Score = 100 bits (240), Expect = 3e-21
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein.
Length = 345
Score = 99.1 bits (236), Expect = 1e-20
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKMFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WP+YVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPRYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein.
Length = 345
Score = 97.9 bits (233), Expect = 2e-20
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Frame = +1
Query: 136 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 294
SPV +N + +N + +RE +TR+ R T L+ + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKGAALEPSMEKIFKIDQMGRWF 84
Query: 295 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 465
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 466 VFRTPALLNLVARNGWMSIIVTLGLMIGSGMVXRGMEY 579
+ RTP L+N + R W++I VT M+G+GM+ R + Y
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGMLVRSIPY 182
>AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 325
Score = 89.0 bits (211), Expect = 1e-17
Identities = 38/78 (48%), Positives = 57/78 (73%)
Frame = +1
Query: 346 VKPGTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSII 525
V G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A+ RTP L+N + R W++I
Sbjct: 85 VAGGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIG 144
Query: 526 VTLGLMIGSGMVXRGMEY 579
VT M+G+GM+ R + Y
Sbjct: 145 VTFAAMVGAGMLVRSIPY 162
>BC071696-1|AAH71696.1| 498|Homo sapiens FLJ10404 protein protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.32
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 474 SENSNCTTSSQHQRTRDVSICCFYTFF 394
SE S+CT+SS HQR CC+ FF
Sbjct: 71 SERSSCTSSSTHQRDGKFCDCCYCEFF 97
>AY330211-1|AAP92113.1| 605|Homo sapiens netrin 4 protein.
Length = 605
Score = 29.9 bits (64), Expect = 6.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 318 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 476
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
>AF297711-1|AAG53651.1| 628|Homo sapiens netrin 4 precursor
protein.
Length = 628
Score = 29.9 bits (64), Expect = 6.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 318 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 476
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
>AF278532-1|AAG30822.1| 628|Homo sapiens beta-netrin protein.
Length = 628
Score = 29.9 bits (64), Expect = 6.9
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 318 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 476
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,020,540
Number of Sequences: 237096
Number of extensions: 1862454
Number of successful extensions: 4438
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4436
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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