Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_A04
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical pr...   171   7e-43
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    32   0.42 
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    32   0.42 
AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical ...    29   3.0  
AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>U58746-2|AAB00622.2|  283|Caenorhabditis elegans Hypothetical
           protein R05G6.7 protein.
          Length = 283

 Score =  171 bits (415), Expect = 7e-43
 Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 2/225 (0%)
 Frame = +1

Query: 133 PHIMLTLXKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLSSK 306
           P     L K A D+F+KGY+FG  K+D  T++     VEF S  + N  SGK+ G+L  K
Sbjct: 3   PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVK 62

Query: 307 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND 486
           + +  YG+T TEKWNT+N L T I + ++   GLKVTL+  +AP  G ++GK+K  +   
Sbjct: 63  YKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALP 122

Query: 487 TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALH 666
           T  V  ++ +  A PV++ A V +  GWL G    FD+   K +  + A G+ +  + LH
Sbjct: 123 TARVTADVGVTSA-PVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLH 181

Query: 667 TNVDNGKDFGGSIYXKVSDKLDCGVSMKWTAGSADTLFGVGAXYA 801
           + V N  DFG S+Y KV+  ++ G  + W  G     + +   YA
Sbjct: 182 SFVINSTDFGASLYHKVASNVEVGTQLGWKVGGNGADYALATKYA 226


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 220  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 375
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 220  TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 375
            T+S  G         + +S    G+ S K+ V  +G T  EKWN D  + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094


>AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical
           protein C26G2.2 protein.
          Length = 952

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 322 YGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND-TVAV 498
           Y  TFT  W+T++T+ T    QD   + +  T E T A  +      + T  T + T +V
Sbjct: 460 YPSTFTSSWSTESTVLT-TQQQDTTTSVILETTEATDAASSSLSPDDVSTQLTTEATTSV 518

Query: 499 NTNLDLD 519
            +++  D
Sbjct: 519 VSSVPPD 525


>AC024813-5|AAK27883.1|  255|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1b protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 238 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 378
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>AC024813-4|AAK27882.1|  297|Caenorhabditis elegans Hypothetical
           protein Y54F10AL.1a protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 238 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 378
           +E   G+ S  E+ K+F   +S+  ++ + LTF  +W   + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229


>Z68004-1|CAA91981.1|  435|Caenorhabditis elegans Hypothetical
           protein F47B10.1 protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 309 KFGGKAAKNLSAFLVGGDSAGEFNTRLALGLQVEFENTKVIALAEDIIG--LLSQGQHNM 136
           + GGK     +  L GG   G F++ L  G+Q+ F   +V   A  +IG  L+++   + 
Sbjct: 60  RIGGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHR 119

Query: 135 GEPC 124
           G+ C
Sbjct: 120 GKKC 123


>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +1

Query: 577 GVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYXKVSDKLDCGVSMKWT 756
           G   QF+T++    K     GY+    +L  N    +DFG +      +++DC VS KWT
Sbjct: 657 GNRNQFETEEE--CKQICLPGYEKSK-SLIPNNQLLEDFGNTEVDDGGERVDCEVS-KWT 712

Query: 757 A-GSADTLFGVG 789
           A GS     G G
Sbjct: 713 AWGSCSVSCGRG 724


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 283 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 378
           VFG LSS     DYG+T   K+ TD      I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,685,761
Number of Sequences: 27780
Number of extensions: 396063
Number of successful extensions: 1039
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)