Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_A03
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 235 2e-62
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 183 2e-46
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 125 5e-29
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 107 1e-23
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 71 8e-13
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.009
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.009
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 31 1.1
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.3
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.4
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 235 bits (576), Expect = 2e-62
Identities = 114/224 (50%), Positives = 146/224 (65%)
Frame = +3
Query: 126 STKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 305
S +S I A RTP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 306 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 485
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 486 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDE 665
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDE
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 666 YAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYK 797
YA+NSYK+SA A+E E+VPV V K+G ++ + E K
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIVDKDEEFTK 239
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +2
Query: 800 VNFEKFTKLSTVFQKENGTVTAGNA 874
VNF+KFT L TVFQK+ GT+TA NA
Sbjct: 240 VNFDKFTSLRTVFQKD-GTITAANA 263
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 183 bits (445), Expect = 2e-46
Identities = 99/224 (44%), Positives = 133/224 (59%)
Frame = +3
Query: 135 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 314
+S +V I S RTP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 315 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 494
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 495 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 674
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAI 180
Query: 675 NSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYKXLI 806
SYK+++ A+ ++ F +E+VPV V R + V+ E E YK LI
Sbjct: 181 ESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLI 223
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 125 bits (301), Expect = 5e-29
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Frame = +3
Query: 39 EIVVTVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXX 218
EI+ ++ LD + + + T AA S K + I A RTP+
Sbjct: 69 EIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTA 124
Query: 219 XXXXXXXVNAAIERAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKSTICTTV 392
+ AA+ER + I+E V++G VC AN GQA ARQA + AGL S TTV
Sbjct: 125 PELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTV 184
Query: 393 NKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFD 572
NK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V D
Sbjct: 185 NKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQD 243
Query: 573 GLTDVYNK 596
G++D ++K
Sbjct: 244 GISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 107 bits (257), Expect = 1e-23
Identities = 58/175 (33%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Frame = +3
Query: 246 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 422
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 423 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 596
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 597 FHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRG 761
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKG 212
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 71.3 bits (167), Expect = 8e-13
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 19/236 (8%)
Frame = +3
Query: 108 TAMAAFST-KVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 284
TA AA + K ++ +V+ AVRTP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 285 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 464
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 465 IILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVY 590
I+AGG+E +S+VP Y + + GM Q+V ++ + +
Sbjct: 131 AIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFS 190
Query: 591 NKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKR 758
MG+ + A ++R++QDE+A+ S+ ++ A + F D +VPV + K+
Sbjct: 191 TGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK 245
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 240 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 419
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 420 SIMLAAQGLQTGAQDIILAGGMESMS 497
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 240 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 419
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 420 SIMLAAQGLQTGAQDIILAGGMESMS 497
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = +3
Query: 507 FYLKRGETSYGGMQLVDGIVF-----DGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYA 671
F+++R E +++V + + L+D + + +C + + + +D D++
Sbjct: 729 FFMERPELRSSCLEVVKELCYLPFIRSSLSD-QARMQIHDCLQESPPMYMRSSEDSDQWT 787
Query: 672 VNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYKXLILKSLQNCLR 833
YK S A Y D L+ +P+ A V +K ++L+SL+ R
Sbjct: 788 DEMYKNSLAVYSTLMPSDPLLLIPL-----ASVYAQSTNVFKRVVLRSLEPVFR 836
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 308 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 463
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 464 YN 469
YN
Sbjct: 242 YN 243
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 552 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 674
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 344 SCNICRFAKKYHMYNCKQSMCLWHEI 421
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,740,368
Number of Sequences: 27780
Number of extensions: 391429
Number of successful extensions: 1118
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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