Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P21
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    29   2.6  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z74041-2|CAA98521.1|  237|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = +1

Query: 379 YFILHI*RHSHYFIQLFIYY----TIIDLISFIVNLV*AINVLGNTY 507
           +  LH  R  HYFI  F+++     II LI FIVN++    V  +TY
Sbjct: 174 FLSLHA-RRFHYFIAKFVFWYGIALIISLIVFIVNVLVVPAVFCSTY 219


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = +1

Query: 379 YFILHI*RHSHYFIQLFIYY----TIIDLISFIVNLV*AINVLGNTY 507
           +  LH  R  HYFI  F+++     II LI FIVN++    V  +TY
Sbjct: 174 FLSLHA-RRFHYFIAKFVFWYGIALIISLIVFIVNVLVVPAVFCSTY 219


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = +1

Query: 379 YFILHI*RHSHYFIQLFIYY----TIIDLISFIVNLV*AINVLGNTY 507
           +  LH  R  HYFI  F+++     II LI FIVN++    V  +TY
Sbjct: 174 FLSLHA-RRFHYFIAKFVFWYGIALIISLIVFIVNVLVVPAVFCSTY 219


>Z74041-2|CAA98521.1|  237|Caenorhabditis elegans Hypothetical
           protein T03F7.6 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +1

Query: 319 TFYLFFSCILLYTRIFLHFYYFILHI*RHSHYFIQLFIYYTIIDLISFIV 468
           ++  +FSC+++     L  Y +++++ +     I   I+ +I+ LISFIV
Sbjct: 27  SYKYWFSCLMILFVAGLGLYLYMMNVVKSMFSVIFSTIFVSILYLISFIV 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,675,480
Number of Sequences: 27780
Number of extensions: 240953
Number of successful extensions: 458
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)