Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P20
(605 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U25188-1|AAA86888.1| 277|Drosophila melanogaster initiation fac... 256 1e-68
AY071514-1|AAL49136.1| 277|Drosophila melanogaster RE56801p pro... 256 1e-68
AE014297-1190|AAF54548.1| 277|Drosophila melanogaster CG6538-PA... 256 1e-68
U02461-1|AAA81888.1| 276|Drosophila melanogaster dTFIIF30 protein. 240 9e-64
AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p pro... 29 6.5
AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-P... 29 6.5
AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-P... 29 6.5
AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-P... 29 6.5
AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-P... 29 6.5
AF293971-1|AAG53639.1| 1673|Drosophila melanogaster Lilliputian ... 28 8.6
AF289034-1|AAK18163.1| 1673|Drosophila melanogaster lilliputian ... 28 8.6
AE014134-513|AAN10400.1| 1673|Drosophila melanogaster CG8817-PC,... 28 8.6
AE014134-512|AAN10399.1| 1673|Drosophila melanogaster CG8817-PB,... 28 8.6
AE014134-511|AAF51180.2| 1673|Drosophila melanogaster CG8817-PA,... 28 8.6
>U25188-1|AAA86888.1| 277|Drosophila melanogaster initiation factor
TFIIF smallsubunit protein.
Length = 277
Score = 256 bits (628), Expect = 1e-68
Identities = 122/189 (64%), Positives = 147/189 (77%), Gaps = 6/189 (3%)
Frame = -3
Query: 603 VNTQSXGVFSHIAPTN------TDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSES 442
V Q+ GVFSH+AP++ T + P+ LYMEGRIVQ LECRP D Y KLK ES
Sbjct: 90 VTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADNCYMKLKLES 149
Query: 441 IKKASMPQRQVQQLDRIVQNFXPVSDHPHNIDYQERKKAEGKKARDDKEAVLNMLFAAFE 262
I+KAS PQR+VQ +D+IVQNF PV DH HNI+Y+ERKKAEGKKARDDK AV++MLF AFE
Sbjct: 150 IRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFE 209
Query: 261 KHQYYNIKDLXKITRQPIVYLKEILKEVCNYNLRNPHKNMWELKPXYRHYKQDVPVETKE 82
KHQYYNIKDL KIT QPI YLKEILK+VC+YN++NPHKNMWELK YRHYK + E KE
Sbjct: 210 KHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELKKEYRHYKTE---EKKE 266
Query: 81 DKNXNXXTE 55
+++ + ++
Sbjct: 267 EEHKSGSSD 275
>AY071514-1|AAL49136.1| 277|Drosophila melanogaster RE56801p
protein.
Length = 277
Score = 256 bits (628), Expect = 1e-68
Identities = 122/189 (64%), Positives = 147/189 (77%), Gaps = 6/189 (3%)
Frame = -3
Query: 603 VNTQSXGVFSHIAPTN------TDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSES 442
V Q+ GVFSH+AP++ T + P+ LYMEGRIVQ LECRP D Y KLK ES
Sbjct: 90 VTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADNCYMKLKLES 149
Query: 441 IKKASMPQRQVQQLDRIVQNFXPVSDHPHNIDYQERKKAEGKKARDDKEAVLNMLFAAFE 262
I+KAS PQR+VQ +D+IVQNF PV DH HNI+Y+ERKKAEGKKARDDK AV++MLF AFE
Sbjct: 150 IRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFE 209
Query: 261 KHQYYNIKDLXKITRQPIVYLKEILKEVCNYNLRNPHKNMWELKPXYRHYKQDVPVETKE 82
KHQYYNIKDL KIT QPI YLKEILK+VC+YN++NPHKNMWELK YRHYK + E KE
Sbjct: 210 KHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELKKEYRHYKTE---EKKE 266
Query: 81 DKNXNXXTE 55
+++ + ++
Sbjct: 267 EEHKSGSSD 275
>AE014297-1190|AAF54548.1| 277|Drosophila melanogaster CG6538-PA
protein.
Length = 277
Score = 256 bits (628), Expect = 1e-68
Identities = 122/189 (64%), Positives = 147/189 (77%), Gaps = 6/189 (3%)
Frame = -3
Query: 603 VNTQSXGVFSHIAPTN------TDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSES 442
V Q+ GVFSH+AP++ T + P+ LYMEGRIVQ LECRP D Y KLK ES
Sbjct: 90 VTKQTLGVFSHMAPSDGKENSTTSAAQPDNEKLYMEGRIVQKLECRPIADNCYMKLKLES 149
Query: 441 IKKASMPQRQVQQLDRIVQNFXPVSDHPHNIDYQERKKAEGKKARDDKEAVLNMLFAAFE 262
I+KAS PQR+VQ +D+IVQNF PV DH HNI+Y+ERKKAEGKKARDDK AV++MLF AFE
Sbjct: 150 IRKASEPQRRVQPIDKIVQNFKPVKDHAHNIEYRERKKAEGKKARDDKNAVMDMLFHAFE 209
Query: 261 KHQYYNIKDLXKITRQPIVYLKEILKEVCNYNLRNPHKNMWELKPXYRHYKQDVPVETKE 82
KHQYYNIKDL KIT QPI YLKEILK+VC+YN++NPHKNMWELK YRHYK + E KE
Sbjct: 210 KHQYYNIKDLVKITNQPISYLKEILKDVCDYNMKNPHKNMWELKKEYRHYKTE---EKKE 266
Query: 81 DKNXNXXTE 55
+++ + ++
Sbjct: 267 EEHKSGSSD 275
>U02461-1|AAA81888.1| 276|Drosophila melanogaster dTFIIF30 protein.
Length = 276
Score = 240 bits (588), Expect = 9e-64
Identities = 111/161 (68%), Positives = 131/161 (81%)
Frame = -3
Query: 537 ETXNLYMEGRIVQXLECRPXDDVTYYKLKSESIKKASMPQRQVQQLDRIVQNFXPVSDHP 358
+ LYMEGRIVQ LECRP D Y KLK ESI+KAS PQR+VQ +D+IVQNF PV DH
Sbjct: 117 DNEKLYMEGRIVQKLECRPIADNCYMKLKLESIRKASEPQRRVQPIDKIVQNFKPVKDHA 176
Query: 357 HNIDYQERKKAEGKKARDDKEAVLNMLFAAFEKHQYYNIKDLXKITRQPIVYLKEILKEV 178
HNI+Y+ERKKAEGKKARDDK AV++MLF AFEKHQYYNIKDL KIT QPI YLKEILK+V
Sbjct: 177 HNIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEILKDV 236
Query: 177 CNYNLRNPHKNMWELKPXYRHYKQDVPVETKEDKNXNXXTE 55
C+YN++NPHKNMWELK YRHYK + E KE+++ + ++
Sbjct: 237 CDYNMKNPHKNMWELKKEYRHYKTE---EKKEEEHKSGSSD 274
>AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p
protein.
Length = 755
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 417 RQVQQLDRIVQNFXPVSDHPHNIDYQERK-------KAEGKKARDDKEAVLNMLFAAFEK 259
+++ +L R + + PVS+ P N+ + RK +A K + EA LF +
Sbjct: 676 KELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIE 735
Query: 258 HQYYNIKDLXKITRQPIVYL 199
H +N+K + +I+ P +++
Sbjct: 736 HSEFNVKAV-EISYNPSIFV 754
>AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-PD,
isoform D protein.
Length = 755
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 417 RQVQQLDRIVQNFXPVSDHPHNIDYQERK-------KAEGKKARDDKEAVLNMLFAAFEK 259
+++ +L R + + PVS+ P N+ + RK +A K + EA LF +
Sbjct: 676 KELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIE 735
Query: 258 HQYYNIKDLXKITRQPIVYL 199
H +N+K + +I+ P +++
Sbjct: 736 HSEFNVKAV-EISYNPSIFV 754
>AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-PC,
isoform C protein.
Length = 755
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 417 RQVQQLDRIVQNFXPVSDHPHNIDYQERK-------KAEGKKARDDKEAVLNMLFAAFEK 259
+++ +L R + + PVS+ P N+ + RK +A K + EA LF +
Sbjct: 676 KELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIE 735
Query: 258 HQYYNIKDLXKITRQPIVYL 199
H +N+K + +I+ P +++
Sbjct: 736 HSEFNVKAV-EISYNPSIFV 754
>AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-PB,
isoform B protein.
Length = 755
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 417 RQVQQLDRIVQNFXPVSDHPHNIDYQERK-------KAEGKKARDDKEAVLNMLFAAFEK 259
+++ +L R + + PVS+ P N+ + RK +A K + EA LF +
Sbjct: 676 KELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIE 735
Query: 258 HQYYNIKDLXKITRQPIVYL 199
H +N+K + +I+ P +++
Sbjct: 736 HSEFNVKAV-EISYNPSIFV 754
>AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-PA,
isoform A protein.
Length = 755
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 417 RQVQQLDRIVQNFXPVSDHPHNIDYQERK-------KAEGKKARDDKEAVLNMLFAAFEK 259
+++ +L R + + PVS+ P N+ + RK +A K + EA LF +
Sbjct: 676 KELDKLSRTINDMTPVSELPFNVRPKSRKEKNKLASRACRLKKKAQHEANKIKLFGLEIE 735
Query: 258 HQYYNIKDLXKITRQPIVYL 199
H +N+K + +I+ P +++
Sbjct: 736 HSEFNVKAV-EISYNPSIFV 754
>AF293971-1|AAG53639.1| 1673|Drosophila melanogaster Lilliputian
protein.
Length = 1673
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 423 PQRQVQQLDRIVQNFXPVSDHPHNI-DYQERKKAEGKK 313
PQ+Q QQLD++ Q + +N+ +Y+ RK+ E +K
Sbjct: 36 PQQQQQQLDQLQQYNNNLYSQNYNMEEYERRKRREREK 73
>AF289034-1|AAK18163.1| 1673|Drosophila melanogaster lilliputian
protein.
Length = 1673
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 423 PQRQVQQLDRIVQNFXPVSDHPHNI-DYQERKKAEGKK 313
PQ+Q QQLD++ Q + +N+ +Y+ RK+ E +K
Sbjct: 36 PQQQQQQLDQLQQYNNNLYSQNYNMEEYERRKRREREK 73
>AE014134-513|AAN10400.1| 1673|Drosophila melanogaster CG8817-PC,
isoform C protein.
Length = 1673
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 423 PQRQVQQLDRIVQNFXPVSDHPHNI-DYQERKKAEGKK 313
PQ+Q QQLD++ Q + +N+ +Y+ RK+ E +K
Sbjct: 36 PQQQQQQLDQLQQYNNNLYSQNYNMEEYERRKRREREK 73
>AE014134-512|AAN10399.1| 1673|Drosophila melanogaster CG8817-PB,
isoform B protein.
Length = 1673
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 423 PQRQVQQLDRIVQNFXPVSDHPHNI-DYQERKKAEGKK 313
PQ+Q QQLD++ Q + +N+ +Y+ RK+ E +K
Sbjct: 36 PQQQQQQLDQLQQYNNNLYSQNYNMEEYERRKRREREK 73
>AE014134-511|AAF51180.2| 1673|Drosophila melanogaster CG8817-PA,
isoform A protein.
Length = 1673
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 423 PQRQVQQLDRIVQNFXPVSDHPHNI-DYQERKKAEGKK 313
PQ+Q QQLD++ Q + +N+ +Y+ RK+ E +K
Sbjct: 36 PQQQQQQLDQLQQYNNNLYSQNYNMEEYERRKRREREK 73
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,396,241
Number of Sequences: 53049
Number of extensions: 430789
Number of successful extensions: 920
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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