Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P20
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical... 127 7e-30
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 31 0.84
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 29 2.6
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 29 2.6
U80842-2|AAB37948.1| 322|Caenorhabditis elegans Serpentine rece... 28 4.5
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 27 7.9
>AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical
protein Y39B6A.36 protein.
Length = 263
Score = 127 bits (306), Expect = 7e-30
Identities = 57/149 (38%), Positives = 91/149 (61%)
Frame = -3
Query: 537 ETXNLYMEGRIVQXLECRPXDDVTYYKLKSESIKKASMPQRQVQQLDRIVQNFXPVSDHP 358
+T L +EGRI++ ECRP Y K+K I K + P++ V+ +++ F PVS H
Sbjct: 115 KTGKLAIEGRIIKKAECRPPATSKYMKMKLAHIVKNTQPKKTVKMIEKAAVKFKPVSVHA 174
Query: 357 HNIDYQERKKAEGKKARDDKEAVLNMLFAAFEKHQYYNIKDLXKITRQPIVYLKEILKEV 178
++ ++KK K R D++ + LF AFEKH +Y ++DL ++ +QP+ Y+KE+L+E+
Sbjct: 175 EDMIKSKQKKDGAKTYRADRDVLRGALFKAFEKHSFYRLQDLQQLLQQPVSYVKEVLQEI 234
Query: 177 CNYNLRNPHKNMWELKPXYRHYKQDVPVE 91
YN PHK++W LKP Y +YK + E
Sbjct: 235 AVYNTAPPHKSLWCLKPEYCNYKVNAQSE 263
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 564 PTNTDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 385
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 384 NFXPVS 367
F VS
Sbjct: 468 LFDRVS 473
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 564 PTNTDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 385
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 384 NFXPVS 367
F VS
Sbjct: 468 LFDRVS 473
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 564 PTNTDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 385
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 384 NFXPVS 367
F VS
Sbjct: 468 LFDRVS 473
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 564 PTNTDSVVPETXNLYMEGRIVQXLECRPXDDVTYYKLKSESIKKASMPQRQVQQLDRIVQ 385
P + VVP+T ++ M + + +E DD+T KL IKK + ++D +
Sbjct: 408 PDDLYLVVPQTSHVDMRKILARNIEFHEFDDMTDRKLSEIRIKKCYEGLSMLTEIDEYLA 467
Query: 384 NFXPVS 367
F VS
Sbjct: 468 LFDRVS 473
>Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical
protein C09F9.3 protein.
Length = 800
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 555 TDSVVPETXNLYMEGRIVQXLECRPX-DDVTYYKLKSESIKKASMPQRQVQQLDRIVQNF 379
TD + L+ G + Q + RP ++ Y ++ +S K P + Q
Sbjct: 642 TDDLEKREWALHANGNMEQH-QTRPFLGEINYQLVRRKSSKAPPTPDYKPPQFG---YGA 697
Query: 378 XPVSDHPHNIDYQERKKAEGKKARDDKEAVLN 283
PVS + + Q++++ KKA DK +N
Sbjct: 698 LPVSKYQQQLQLQQQQQQNEKKASQDKHRNIN 729
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 453 KSESIKKASMPQRQVQQLDRIVQNFXPVSDHP 358
+SE +S P++ VQQ DR+++N + HP
Sbjct: 288 ESEQPSTSSAPRKLVQQRDRLLENLYQSNRHP 319
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 453 KSESIKKASMPQRQVQQLDRIVQNFXPVSDHP 358
+SE +S P++ VQQ DR+++N + HP
Sbjct: 288 ESEQPSTSSAPRKLVQQRDRLLENLYQSNRHP 319
>U80842-2|AAB37948.1| 322|Caenorhabditis elegans Serpentine
receptor, class i protein51 protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 193 FFQIYYWLSGDLXKILNIVILMFL 264
F +W +GDL I+ I+I++FL
Sbjct: 259 FLACAFWATGDLRTIIEIIIVLFL 282
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 358 WMVRYWXEV--LNNPVKLLHLSLRHGCFLY*FRFKLIVCHIIXWSAFQXLYNPTL 516
W W V +N+P LL+ + HG + Y F ++C + +AF+ P+L
Sbjct: 300 WGHTLWSTVRTINSPYDLLYRMIEHGPYQYPFTALELLC-LFEETAFKMAEEPSL 353
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,260,546
Number of Sequences: 27780
Number of extensions: 236652
Number of successful extensions: 689
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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