Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P20
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    24   1.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   3.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   7.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.1  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 440 IDSDLSL*YVTSSXGLHSNXCTILPSMXRFXV-SGTTESVFVGA 568
           I SD+++ +     GLH+N CT L     F +  GT     +GA
Sbjct: 9   IASDMAVLFPEKIIGLHNNMCTSLNLSNLFWLFVGTYFPSLIGA 52


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 396 CQAVALVAEAWMLSLLIQI*AYSMSHHHXVCIPIXV 503
           C+  A V+E      ++ I A+SM  +  +C P+ V
Sbjct: 114 CKIRAYVSEMSSYVSVLTIVAFSMERYLAICHPLRV 149


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 290 CSICCLQHLRNI 255
           C++ CL+ LRN+
Sbjct: 399 CAVSCLRELRNL 410


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/33 (21%), Positives = 21/33 (63%)
 Frame = -3

Query: 210 IVYLKEILKEVCNYNLRNPHKNMWELKPXYRHY 112
           I+Y   + +   +Y+LR+   N++++K  ++++
Sbjct: 9   ILYFSIVCQAKAHYSLRDFKANIFQVKYQWKYF 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,809
Number of Sequences: 438
Number of extensions: 2891
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)