Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P19
(358 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal prot... 183 5e-47
X13625-1|CAB38441.1| 114|Drosophila melanogaster protein ( Dros... 183 5e-47
AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p pro... 183 5e-47
AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-P... 183 5e-47
AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-P... 183 5e-47
AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-P... 183 5e-47
AY070900-1|AAL48522.1| 463|Drosophila melanogaster RE01590p pro... 29 2.3
AE014134-1736|AAF52836.1| 463|Drosophila melanogaster CG13126-P... 29 2.3
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 28 4.0
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 28 4.0
M68866-1|AAA28879.1| 1348|Drosophila melanogaster stranded at se... 27 5.3
AE014297-574|AAN13346.1| 1348|Drosophila melanogaster CG2507-PA,... 27 5.3
AY051979-1|AAK93403.1| 1693|Drosophila melanogaster LD44801p pro... 27 7.0
AE014297-573|AAF54052.2| 1693|Drosophila melanogaster CG2507-PB,... 27 7.0
>X14247-1|CAA32463.1| 114|Drosophila melanogaster ribosomal protein
S31 protein.
Length = 114
Score = 183 bits (446), Expect = 5e-47
Identities = 84/103 (81%), Positives = 91/103 (88%)
Frame = -2
Query: 324 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 145
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 144 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP 16
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP P
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFP 103
>X13625-1|CAB38441.1| 114|Drosophila melanogaster protein (
Drosophila melanogastermRNA for putative ribosomal
protein S31. ).
Length = 114
Score = 183 bits (446), Expect = 5e-47
Identities = 84/103 (81%), Positives = 91/103 (88%)
Frame = -2
Query: 324 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 145
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 144 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP 16
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP P
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFP 103
>AY069761-1|AAL39906.1| 114|Drosophila melanogaster RE01079p
protein.
Length = 114
Score = 183 bits (446), Expect = 5e-47
Identities = 84/103 (81%), Positives = 91/103 (88%)
Frame = -2
Query: 324 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 145
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 144 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP 16
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP P
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFP 103
>AE014134-2931|AAN11005.1| 114|Drosophila melanogaster CG10305-PC,
isoform C protein.
Length = 114
Score = 183 bits (446), Expect = 5e-47
Identities = 84/103 (81%), Positives = 91/103 (88%)
Frame = -2
Query: 324 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 145
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 144 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP 16
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP P
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFP 103
>AE014134-2930|AAF53666.1| 114|Drosophila melanogaster CG10305-PB,
isoform B protein.
Length = 114
Score = 183 bits (446), Expect = 5e-47
Identities = 84/103 (81%), Positives = 91/103 (88%)
Frame = -2
Query: 324 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 145
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 144 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP 16
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP P
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFP 103
>AE014134-2929|AAN11004.1| 114|Drosophila melanogaster CG10305-PA,
isoform A protein.
Length = 114
Score = 183 bits (446), Expect = 5e-47
Identities = 84/103 (81%), Positives = 91/103 (88%)
Frame = -2
Query: 324 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 145
MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI +AS++
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 144 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE*LP 16
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ RRIRTPP P
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFP 103
>AY070900-1|AAL48522.1| 463|Drosophila melanogaster RE01590p
protein.
Length = 463
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 237 RTARSLCISRL*RDHVHAWRVLHYGAYES 323
R R L I++ ++AW+ + YGAYES
Sbjct: 131 RRKRELEINKRLGQRIYAWKRIEYGAYES 159
>AE014134-1736|AAF52836.1| 463|Drosophila melanogaster CG13126-PA
protein.
Length = 463
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 237 RTARSLCISRL*RDHVHAWRVLHYGAYES 323
R R L I++ ++AW+ + YGAYES
Sbjct: 131 RRKRELEINKRLGQRIYAWKRIEYGAYES 159
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 297 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 196
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 297 RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 196
+A H G V V+CT C R + +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498
>M68866-1|AAA28879.1| 1348|Drosophila melanogaster stranded at second
protein.
Length = 1348
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/87 (20%), Positives = 39/87 (44%)
Frame = -2
Query: 285 GRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHY 106
G G + T+ +P + A ++ +E + I+ S+ +F +P++Y LH
Sbjct: 910 GAGQDEETEATSTHSSIPANGANN---LQPDIEVHTLEAIDPRSIRIVFTVPQVYVNLHG 966
Query: 105 CVSCAIHSKVVRNRSKKDRRIRTPPQE 25
V + + S +++I PP++
Sbjct: 967 RVELRYSNGPSNDTSTWEQQIFAPPED 993
>AE014297-574|AAN13346.1| 1348|Drosophila melanogaster CG2507-PA,
isoform A protein.
Length = 1348
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/87 (20%), Positives = 39/87 (44%)
Frame = -2
Query: 285 GRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHY 106
G G + T+ +P + A ++ +E + I+ S+ +F +P++Y LH
Sbjct: 910 GAGQDEETEATSTHSSIPANGANN---LQPDIEVHTLEAIDPRSIRIVFTVPQVYVNLHG 966
Query: 105 CVSCAIHSKVVRNRSKKDRRIRTPPQE 25
V + + S +++I PP++
Sbjct: 967 RVELRYSNGPSNDTSTWEQQIFAPPED 993
>AY051979-1|AAK93403.1| 1693|Drosophila melanogaster LD44801p protein.
Length = 1693
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = -2
Query: 192 VEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE 25
+E + I+ S+ +F +P++Y LH V + + S +++I PP++
Sbjct: 1283 IEVHTLEAIDPRSIRIVFTVPQVYVNLHGRVELRYSNGPSNDTSTWEQQIFAPPED 1338
>AE014297-573|AAF54052.2| 1693|Drosophila melanogaster CG2507-PB,
isoform B protein.
Length = 1693
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = -2
Query: 192 VEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPQE 25
+E + I+ S+ +F +P++Y LH V + + S +++I PP++
Sbjct: 1283 IEVHTLEAIDPRSIRIVFTVPQVYVNLHGRVELRYSNGPSNDTSTWEQQIFAPPED 1338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,465,634
Number of Sequences: 53049
Number of extensions: 287570
Number of successful extensions: 853
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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