Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P18
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034488-8|CAE46690.1| 395|Caenorhabditis elegans Hypothetical ... 51 6e-07
AL034488-7|CAA22452.1| 396|Caenorhabditis elegans Hypothetical ... 51 6e-07
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 39 0.002
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 39 0.003
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 39 0.003
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 39 0.003
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 39 0.003
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 39 0.003
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 30 1.5
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z73974-2|CAA98271.2| 713|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 29 2.7
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 29 2.7
AL023830-2|CAA19473.1| 413|Caenorhabditis elegans Hypothetical ... 29 2.7
AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024843-4|AAF60842.2| 199|Caenorhabditis elegans Hypothetical ... 28 4.6
Z11115-18|CAI46594.1| 243|Caenorhabditis elegans Hypothetical p... 28 6.1
Z11115-17|CAA77455.3| 228|Caenorhabditis elegans Hypothetical p... 28 6.1
AY513235-1|AAS21678.1| 228|Caenorhabditis elegans thiamine pyro... 28 6.1
U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine rece... 27 8.1
>AL034488-8|CAE46690.1| 395|Caenorhabditis elegans Hypothetical
protein Y54G11A.8b protein.
Length = 395
Score = 51.2 bits (117), Expect = 6e-07
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = -1
Query: 617 ITYIYDVMAXLALEREHLDKAKDLFVAVTQR-IMADGATEDDFRVVHISTKLARISHLKK 441
IT +YD MA E+ +LD+A F V QR + G + D + +S KLA I +
Sbjct: 131 ITRVYDEMANTFYEKMNLDEADKYFRIVIQRLVQLHGKKDFDPEFIGVSLKLADILAHRG 190
Query: 440 DYQTAQMGYEWCLEKLEKIIKSDPSEEKMKLFALAEDWYGRLFLDTNQYEHALKLMTDSL 261
D ++A+ G++ C+ + K++ EE MK F++A +G L D + + + TD +
Sbjct: 191 DLESAESGFKHCVRRQMKVM-----EEHMKKFSVA---HGALVEDRHTVDTFGPMYTDPI 242
>AL034488-7|CAA22452.1| 396|Caenorhabditis elegans Hypothetical
protein Y54G11A.8a protein.
Length = 396
Score = 51.2 bits (117), Expect = 6e-07
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = -1
Query: 617 ITYIYDVMAXLALEREHLDKAKDLFVAVTQR-IMADGATEDDFRVVHISTKLARISHLKK 441
IT +YD MA E+ +LD+A F V QR + G + D + +S KLA I +
Sbjct: 132 ITRVYDEMANTFYEKMNLDEADKYFRIVIQRLVQLHGKKDFDPEFIGVSLKLADILAHRG 191
Query: 440 DYQTAQMGYEWCLEKLEKIIKSDPSEEKMKLFALAEDWYGRLFLDTNQYEHALKLMTDSL 261
D ++A+ G++ C+ + K++ EE MK F++A +G L D + + + TD +
Sbjct: 192 DLESAESGFKHCVRRQMKVM-----EEHMKKFSVA---HGALVEDRHTVDTFGPMYTDPI 243
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -1
Query: 317 LFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEA 138
LF +++ A L +LE + V + +A Q+N++ +C GK +E Y+K A
Sbjct: 320 LFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRA 379
Query: 137 IEI-GKKL---EMELGTMYVNLGRAYIKKKLLAEARK 39
+EI KL + + NL AY+K+ EA +
Sbjct: 380 LEIYESKLGPDDPNVANTKNNLSSAYLKQGKYKEAEE 416
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 314 FLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAI 135
+ +YE A+ L +LE ++ S + +AT +N + V K E+ + EA+
Sbjct: 237 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEAL 296
Query: 134 EIGKK 120
I +K
Sbjct: 297 SIREK 301
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -1
Query: 317 LFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEA 138
LF +++ A L +LE + V + +A Q+N++ +C GK +E Y+K A
Sbjct: 299 LFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRA 358
Query: 137 IEI-GKKL---EMELGTMYVNLGRAYIKKKLLAEARK 39
+EI KL + + NL AY+K+ EA +
Sbjct: 359 LEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEE 395
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 314 FLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAI 135
+ +YE A+ L +LE ++ S + +AT +N + V K E+ + EA+
Sbjct: 216 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEAL 275
Query: 134 EIGKK 120
I +K
Sbjct: 276 SIREK 280
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -1
Query: 317 LFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEA 138
LF +++ A L +LE + V + +A Q+N++ +C GK +E Y+K A
Sbjct: 299 LFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRA 358
Query: 137 IEI-GKKL---EMELGTMYVNLGRAYIKKKLLAEARK 39
+EI KL + + NL AY+K+ EA +
Sbjct: 359 LEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEE 395
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 314 FLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAI 135
+ +YE A+ L +LE ++ S + +AT +N + V K E+ + EA+
Sbjct: 216 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEAL 275
Query: 134 EIGKK 120
I +K
Sbjct: 276 SIREK 280
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -1
Query: 317 LFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEA 138
LF +++ A L +LE + V + +A Q+N++ +C GK +E Y+K A
Sbjct: 299 LFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRA 358
Query: 137 IEI-GKKL---EMELGTMYVNLGRAYIKKKLLAEARK 39
+EI KL + + NL AY+K+ EA +
Sbjct: 359 LEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEE 395
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 314 FLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAI 135
+ +YE A+ L +LE ++ S + +AT +N + V K E+ + EA+
Sbjct: 216 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEAL 275
Query: 134 EIGKK 120
I +K
Sbjct: 276 SIREK 280
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -1
Query: 317 LFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEA 138
LF +++ A L +LE + V + +A Q+N++ +C GK +E Y+K A
Sbjct: 320 LFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRA 379
Query: 137 IEI-GKKL---EMELGTMYVNLGRAYIKKKLLAEARK 39
+EI KL + + NL AY+K+ EA +
Sbjct: 380 LEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEE 416
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 314 FLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAI 135
+ +YE A+ L +LE ++ S + +AT +N + V K E+ + EA+
Sbjct: 237 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEAL 296
Query: 134 EIGKK 120
I +K
Sbjct: 297 SIREK 301
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = -1
Query: 317 LFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEA 138
LF +++ A L +LE + V + +A Q+N++ +C GK +E Y+K A
Sbjct: 299 LFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRA 358
Query: 137 IEI-GKKL---EMELGTMYVNLGRAYIKKKLLAEARK 39
+EI KL + + NL AY+K+ EA +
Sbjct: 359 LEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEE 395
Score = 31.1 bits (67), Expect = 0.66
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -1
Query: 314 FLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAI 135
+ +YE A+ L +LE ++ S + +AT +N + V K E+ + EA+
Sbjct: 216 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEAL 275
Query: 134 EIGKK 120
I +K
Sbjct: 276 SIREK 280
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Frame = -1
Query: 347 FALAEDWYGRLFLDTNQYEHALKLMTDSLEKMQSVSDIEKE-------HIATQMNDIGTV 189
F L WY R + L MTD + K +S SD+++E I + + +V
Sbjct: 187 FGLTNAWYARFASTYKTFHTELDKMTDMMRKSKS-SDVQEEFSKRIDQEIKRMSDYVQSV 245
Query: 188 C-DLLGKTDESLHYFKEAIEIGKKLE 114
C ++ K E F + I KK E
Sbjct: 246 CLEIANKDKEYQKSFTALVAINKKDE 271
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Frame = -1
Query: 458 ISHLKKDYQTAQMGYEWCLEKLEKIIKSDPS--EEKMKLFALAEDWYGRLFLDTNQYEHA 285
I LKK ++ + KLE +K + S E+ K+ + + T + EHA
Sbjct: 217 ILELKKKHEQELQMKNSTIMKLEDNVKFNNSSNEQFSKMTTENQQLKDWMATKTKEVEHA 276
Query: 284 LKLMTDSLEKMQSVSDIEKEHIATQMNDI---GTVCDLLGKTDESLHYFKEAIE 132
K+M + +K ++ I ND+ G D + + E H KE ++
Sbjct: 277 AKMMLELKQKHIEELQMKTTQITKLENDVKLNGNFMDHISELTEENHNLKEQLK 330
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 395 LEKIIKSDPSEEKMKLFALAEDWYGRLF-LDTNQYEHALKLMTDSLEKMQSVSDIEKEHI 219
L ++ K+ E+ +KL LAE + RL+ +D + H + +E +Q +SD E + +
Sbjct: 192 LSQVAKAFHLEKALKLLKLAEQRHARLYSIDLQKINHLTHVFV--VEMLQKLSDEEADEL 249
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 395 LEKIIKSDPSEEKMKLFALAEDWYGRLF-LDTNQYEHALKLMTDSLEKMQSVSDIEKEHI 219
L ++ K+ E+ +KL LAE + RL+ +D + H + +E +Q +SD E + +
Sbjct: 192 LSQVAKAFHLEKALKLLKLAEQRHARLYSIDLQKINHLTHVFV--VEMLQKLSDEEADEL 249
>Z73974-2|CAA98271.2| 713|Caenorhabditis elegans Hypothetical
protein F29F11.4 protein.
Length = 713
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 395 LEKIIKSDPSEEKMKLFALAEDWYGRLFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIA 216
L +I + SEEK FA +DW+ D N + L+ D + +++ + + IA
Sbjct: 365 LMQIAATHVSEEKRGFFAEFKDWFAGKVTD-NVIQSKLEDSDDESDSEEALEEFDSPQIA 423
Query: 215 T-QMNDIGTVC 186
T ND+ VC
Sbjct: 424 TVTANDL-IVC 433
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 395 LEKIIKSDPSEEKMKLFALAEDWYGRLF-LDTNQYEHALKLMTDSLEKMQSVSDIEKEHI 219
L ++ K+ E+ +KL LAE + RL+ +D + H + +E +Q +SD E + +
Sbjct: 192 LSQVAKAFHLEKALKLLKLAEQRHARLYSIDLQKINHLTHVFV--VEMLQKLSDEEADEL 249
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 395 LEKIIKSDPSEEKMKLFALAEDWYGRLF-LDTNQYEHALKLMTDSLEKMQSVSDIEKEHI 219
L ++ K+ E+ +KL LAE + RL+ +D + H + +E +Q +SD E + +
Sbjct: 192 LSQVAKAFHLEKALKLLKLAEQRHARLYSIDLQKINHLTHVFV--VEMLQKLSDEEADEL 249
>AL023830-2|CAA19473.1| 413|Caenorhabditis elegans Hypothetical
protein Y26E6A.2 protein.
Length = 413
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 440 DYQTAQMGYEWCLEKLEKIIKSDPSEEK 357
D+ + +M W LEK ++ +SDP EK
Sbjct: 190 DFSSGEMNVRWILEKNQQENESDPDSEK 217
>AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical
protein H12I13.2 protein.
Length = 326
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 365 EEKMKLFALAEDWYGRLFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTV 189
E+K+K+ L ED + R+F +N YE L L ++K EK A + V
Sbjct: 202 EQKLKIIKLQEDRFDRIFA-SNMYEETLGLRV-HIQKNSLRESFEKFFFANDAYSVDVV 258
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -1
Query: 248 SVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAIEIGKKLEMELGTMYVNLGRAYI 69
S I+ EH + G ++ + DE + FK A+E K L T + ++ + +
Sbjct: 432 SYGSIDMEHEFIKTLGEGAELEVQRRRDERITVFKNAVEALGKAMNNLRTYHFDIAKGAL 491
Query: 68 ---KKKLLAEARKNWGRATK 18
K+ E WG+ K
Sbjct: 492 FNCNKRSYCEHHLKWGQVRK 511
>AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical
protein Y48A6B.8 protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -1
Query: 248 SVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAIEIGKKLEMELGTMYVNLGRAYI 69
S I++EH + G ++ + DE + FK A+E K L T + ++ + +
Sbjct: 432 SYGSIDREHEFIKTLGEGAELEVQRRRDERITVFKNAVEALGKAMNNLRTYHFDIAKGAL 491
Query: 68 ---KKKLLAEARKNWGRATK 18
K E WG+ K
Sbjct: 492 FNCNKPSYCEHHLKWGQVRK 511
>AC024843-4|AAF60842.2| 199|Caenorhabditis elegans Hypothetical
protein Y61A9LA.4 protein.
Length = 199
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -1
Query: 248 SVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAIEIGKKLEMELGTMYVNLGRAYI 69
S I+ EH + G ++ + DE + FK A+E K L T + ++ + +
Sbjct: 97 SYGSIDMEHEFIKTLGEGAELEVQRRRDERITVFKNAVEALGKAMNNLRTYHFDIAKGAL 156
Query: 68 ---KKKLLAEARKNWGRATK 18
K+ E WG+ K
Sbjct: 157 FNCNKRSYCEHHLKWGQVRK 176
>Z11115-18|CAI46594.1| 243|Caenorhabditis elegans Hypothetical
protein ZK637.9b protein.
Length = 243
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 479 ISTKLARISHLK-KDYQTAQMGYEWCLEK 396
I TK A++ HL +DY +WCLE+
Sbjct: 77 IDTKNAKVVHLPDQDYTDLSKSVQWCLEQ 105
>Z11115-17|CAA77455.3| 228|Caenorhabditis elegans Hypothetical
protein ZK637.9a protein.
Length = 228
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 479 ISTKLARISHLK-KDYQTAQMGYEWCLEK 396
I TK A++ HL +DY +WCLE+
Sbjct: 77 IDTKNAKVVHLPDQDYTDLSKSVQWCLEQ 105
>AY513235-1|AAS21678.1| 228|Caenorhabditis elegans thiamine
pyrophosphokinase protein.
Length = 228
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 479 ISTKLARISHLK-KDYQTAQMGYEWCLEK 396
I TK A++ HL +DY +WCLE+
Sbjct: 77 IDTKNAKVVHLPDQDYTDLSKSVQWCLEQ 105
>U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 32 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 607 FMMLWXTWHLKENT*IRLKT-FLLLSLKESWLMVQLKMIFELFIS 476
F+M+W TW+ ++ L + +L + S + V L + +LF++
Sbjct: 214 FLMMWYTWNDRKKINYDLNSQYLKVEQHHSLMAVSLNSLLQLFVT 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,735,587
Number of Sequences: 27780
Number of extensions: 249806
Number of successful extensions: 707
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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