Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P15
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 72 5e-13
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 72 5e-13
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 72 5e-13
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 64 8e-11
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 64 8e-11
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 56 3e-08
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 56 3e-08
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 56 3e-08
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 53 3e-07
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 53 3e-07
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 43 2e-04
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 33 0.17
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 33 0.22
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 32 0.38
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 30 1.6
U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine rec... 28 6.3
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DA KNL + +RR++EL FQ +ED+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1844 DANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQ 1890
Score = 34.3 bits (75), Expect = 0.095
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKN 681
DAQKNL++ + +++EL Q EE+++N
Sbjct: 1647 DAQKNLKRYQEQVRELQLQVEEEQRN 1672
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DA KNL + +RR++EL FQ +ED+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1844 DANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQ 1890
Score = 34.3 bits (75), Expect = 0.095
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKN 681
DAQKNL++ + +++EL Q EE+++N
Sbjct: 1647 DAQKNLKRYQEQVRELQLQVEEEQRN 1672
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DA KNL + +RR++EL FQ +ED+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1847 DANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQ 1893
Score = 34.3 bits (75), Expect = 0.095
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKN 681
DAQKNL++ + +++EL Q EE+++N
Sbjct: 1650 DAQKNLKRYQEQVRELQLQVEEEQRN 1675
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXA 579
+ QK LR +R+ +EL FQ +ED+K+ ERM DL++KLQQKIKTYKRQ A
Sbjct: 1845 ETQKVLRNKDRKCRELQFQVDEDKKSQERMYDLIEKLQQKIKTYKRQIEDAESLASGNLA 1904
Query: 578 KFRK 567
K+R+
Sbjct: 1905 KYRQ 1908
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
D +KN RK ERR+KE+ FQ E++KN ER+ +LVDKLQ K+K +KRQ
Sbjct: 1848 DTEKNWRKAERRVKEVEFQVVEEKKNEERLTELVDKLQCKLKIFKRQ 1894
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQD 663
DAQK ++K ++EL FQ EE+++ + +++
Sbjct: 1651 DAQKTIKKYMETVQELQFQIEEEQRQKDEIRE 1682
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
D +KN RK ERR+KE+ FQ E++KN ER+ +LVDKLQ K+K +KRQ
Sbjct: 1848 DTEKNWRKAERRVKEVEFQVVEEKKNEERLTELVDKLQCKLKIFKRQ 1894
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQD 663
DAQK ++K ++EL FQ EE+++ + +++
Sbjct: 1651 DAQKTIKKYMETVQELQFQIEEEQRQKDEIRE 1682
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -2
Query: 749 KNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFR 570
K K ERR +EL FQ EED+K +R+Q+ V+KLQQKI+ KRQ +KFR
Sbjct: 1845 KGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFR 1904
Query: 569 K 567
+
Sbjct: 1905 Q 1905
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQD 663
DAQKNL+K ++KEL Q +++++ E +++
Sbjct: 1645 DAQKNLKKLFDQVKELQGQVDDEQRRREEIRE 1676
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -2
Query: 749 KNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFR 570
K K ERR +EL FQ EED+K +R+Q+ V+KLQQKI+ KRQ +KFR
Sbjct: 1845 KGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFR 1904
Query: 569 K 567
+
Sbjct: 1905 Q 1905
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQD 663
DAQKNL+K ++KEL Q +++++ E +++
Sbjct: 1645 DAQKNLKKLFDQVKELQGQVDDEQRRREEIRE 1676
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -2
Query: 749 KNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXAKFR 570
K K ERR +EL FQ EED+K +R+Q+ V+KLQQKI+ KRQ +KFR
Sbjct: 1845 KGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFR 1904
Query: 569 K 567
+
Sbjct: 1905 Q 1905
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQD 663
DAQKNL+K ++KEL Q +++++ E +++
Sbjct: 1645 DAQKNLKKLFDQVKELQGQVDDEQRRREEIRE 1676
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
+A K L + +R+++E FQ ED+KN++++Q+LV+KL K+K K+Q
Sbjct: 1851 EASKTLARADRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQ 1897
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DAQKN+R+ +I+EL +E++K E ++ + ++K+ K++
Sbjct: 1654 DAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQE 1700
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
+A K L + +R+++E FQ ED+KN++++Q+LV+KL K+K K+Q
Sbjct: 1851 EASKTLARADRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQ 1897
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DAQKN+R+ +I+EL +E++K E ++ + ++K+ K++
Sbjct: 1654 DAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQE 1700
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
+A K L + +R+++E FQ ED+KN++++Q+LV+KL K+K K+Q
Sbjct: 1851 EASKTLARADRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQ 1897
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DAQKN+R+ +I+EL +E++K E ++ + ++K+ K++
Sbjct: 1654 DAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQE 1700
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
+ Q LRK +RRIKE+ +E+ KN QD D+L +K+ KRQ
Sbjct: 763 ETQNALRKKDRRIKEVQQLVDEEHKNFVMAQDTADRLTEKLNIQKRQ 809
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
+ Q LRK +RRIKE+ +E+ KN QD D+L +K+ KRQ
Sbjct: 763 ETQNALRKKDRRIKEVQQLVDEEHKNFVMAQDTADRLTEKLNIQKRQ 809
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
+ Q LRK +RRIKE+ +E+ KN QD D+L +K+ KRQ
Sbjct: 779 ETQNALRKKDRRIKEVQQLVDEEHKNFVMAQDTADRLTEKLNIQKRQ 825
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -2
Query: 671 MQDLVDKLQQKIKTYKRQ 618
+QDL+DKLQQK+KT K+Q
Sbjct: 1 LQDLIDKLQQKLKTQKKQ 18
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/46 (28%), Positives = 30/46 (65%)
Frame = -2
Query: 755 AQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
A + R+ E+R+ + T Q E++++ +E+ ++L++K K + +RQ
Sbjct: 1834 ANRAARRLEKRLNDTTQQFEDEKRANEQAKELLEKSNLKNRNLRRQ 1879
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 618
DAQKN+R+ +I+EL +E++K E ++ + ++K+ K++
Sbjct: 154 DAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQE 200
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/32 (34%), Positives = 23/32 (71%)
Frame = -2
Query: 758 DAQKNLRKXERRIKELTFQAEEDRKNHERMQD 663
DAQKNL+K ++K+L Q +++++ E +++
Sbjct: 154 DAQKNLKKLFDQVKQLQGQVDDEQRRREEIRE 185
>U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 36 protein.
Length = 354
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -1
Query: 339 TDFSLKT*LFIH*LLMMSEKL*NTKYAILFFCKPNKNIYTLGI*CFYERLFCNVVDIYLY 160
T +S + +F+H L+++ + K + K + T + FY + DIY
Sbjct: 26 TSYSSRLNIFLHNLVIILTMVFTRKAVKIMLSKSMFSTTTRNL-LFYCMNYYIFHDIYFA 84
Query: 159 YLLPWSMYRECE 124
+ + WS+YR E
Sbjct: 85 FTMNWSLYRSIE 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,862,438
Number of Sequences: 27780
Number of extensions: 276183
Number of successful extensions: 1123
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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