Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P14
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 30 1.2
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 30 1.2
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 30 1.2
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 30 1.2
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 30 1.2
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 30 1.2
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 30 1.2
U40028-9|AAA81120.1| 256|Caenorhabditis elegans Serpentine rece... 28 6.4
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 27 8.4
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 298 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 326
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 232 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 260
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 232 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 260
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 298 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 326
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 232 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 260
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 232 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 260
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 232 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 260
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 482 CVVVRQRCTVVHLFPSGACCPAHIRCLLDS 571
C V Q CT + + P+G CCP + C D+
Sbjct: 232 CPKVNQECTWIGI-PTGECCPVCLGCQTDN 260
>U40028-9|AAA81120.1| 256|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 39 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 394 SSGQSCQKGSRVIAEIGRDGLGLKISAQGLRRSPPTLY-SGAPVPQWGLLSGSYSMPFRL 570
SSG + GSR + G G+G+ G S LY GA + G G + R
Sbjct: 60 SSGTTSMMGSRALGYGGPAGMGMMGGGLGALTSAAALYGGGAGLGGMGGYGGGFGAASRG 119
Query: 571 LGLRGSMRGAV 603
+ + G++ V
Sbjct: 120 ISVGGNVATGV 130
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 370 RSHLAIGFSSGQSCQKGSRVIAE 438
+SH A+ F+ GQ C GSR E
Sbjct: 326 QSHHALFFNQGQCCSAGSRTFVE 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,383
Number of Sequences: 27780
Number of extensions: 245763
Number of successful extensions: 628
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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