Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P14
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.5  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 587 DPLKPKSLKGIEYEPDN 537
           D  KP++ KGI  EP N
Sbjct: 550 DSTKPETSKGINAEPSN 566


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 526  QWGLLSGSYSMPFRLLGLRGSMRGAVRSVMGXARS 630
            Q+G   G Y  P+   G RGS+    R  +G AR+
Sbjct: 1819 QYGSQYGQYGAPYDHYGSRGSVG---RRSVGSARN 1850


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
 Frame = -3

Query: 434 AITRDPF--WHDWP-ELKP 387
           AI+  P   W+DWP EL+P
Sbjct: 166 AISSPPLAGWNDWPEELEP 184


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
 Frame = -3

Query: 434 AITRDPF--WHDWP-ELKP 387
           AI+  P   W+DWP EL+P
Sbjct: 166 AISSPPLAGWNDWPEELEP 184


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -1

Query: 250 KHRIKRYLLESRSTKTL 200
           K ++KR+ +E+++ KTL
Sbjct: 443 KAQVKRFRMETKAAKTL 459


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
 Frame = -3

Query: 434 AITRDPF--WHDWP-ELKP 387
           AI+  P   W+DWP EL+P
Sbjct: 166 AISSPPLAGWNDWPEELEP 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,783
Number of Sequences: 438
Number of extensions: 2776
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)