Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P06
         (326 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3ZQL2 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_A7SM04 Cluster: Predicted protein; n=1; Nematostella ve...    33   1.2  
UniRef50_A6GI22 Cluster: Uroporphyrinogen III synthase/methyltra...    32   2.1  
UniRef50_A1SII9 Cluster: Putative uncharacterized protein precur...    31   4.9  
UniRef50_Q9W0E1 Cluster: CG7852-PA, isoform A; n=3; Sophophora|R...    31   4.9  
UniRef50_Q5KH00 Cluster: Expressed protein; n=2; Filobasidiella ...    31   4.9  
UniRef50_Q17S71 Cluster: RNA-dependent RNA polymerase; n=8; Lute...    30   8.6  
UniRef50_Q2JGX1 Cluster: Putative uncharacterized protein precur...    30   8.6  
UniRef50_A1R6N6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot...    30   8.6  
UniRef50_Q16UN5 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_A3ZQL2 Cluster: Putative uncharacterized protein; n=1;
           Blastopirellula marina DSM 3645|Rep: Putative
           uncharacterized protein - Blastopirellula marina DSM
           3645
          Length = 180

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -3

Query: 159 YTPGLVPPVISPYASPAAVPIT---YSALPSATYY 64
           Y P   PP+ + Y SPA   +T   YS  P+ TYY
Sbjct: 78  YAPAYAPPITTNYYSPAPSVVTTNYYSPAPTTTYY 112


>UniRef50_A7SM04 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 916

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -2

Query: 250 SVGRVSGR-SKP*GSPRTSTATSSIHRPGLRLYTRLSTSCDISIRFSGC--CPHH 95
           S G  SG  ++P  +PR+S+++   H PG  L T L TS   S R  G    PH+
Sbjct: 34  SAGIASGSLTRPFSNPRSSSSSRLAHTPGTNLKTPLVTSTSTSHRTPGSSRTPHY 88


>UniRef50_A6GI22 Cluster: Uroporphyrinogen III
           synthase/methyltransferase; n=1; Plesiocystis pacifica
           SIR-1|Rep: Uroporphyrinogen III
           synthase/methyltransferase - Plesiocystis pacifica SIR-1
          Length = 512

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -3

Query: 192 QLLPYTGLDYVYTPGLVPPVISPYASPAAVPITY-SALPSATY 67
           ++L   G+DY + PG+  P+ +P A  A +PIT+ S  PS ++
Sbjct: 96  KVLRAAGVDYEFVPGVSSPIAAPEA--AGIPITHRSHTPSVSF 136


>UniRef50_A1SII9 Cluster: Putative uncharacterized protein
           precursor; n=1; Nocardioides sp. JS614|Rep: Putative
           uncharacterized protein precursor - Nocardioides sp.
           (strain BAA-499 / JS614)
          Length = 361

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -3

Query: 141 PPVISPYASPAAVPITYSALPSATY 67
           P  +SP AS AAVP  YS +P A +
Sbjct: 294 PSAVSPVASVAAVPAWYSGMPRAAF 318


>UniRef50_Q9W0E1 Cluster: CG7852-PA, isoform A; n=3; Sophophora|Rep:
           CG7852-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 1449

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 280 HVQQIXRFLRSVGRVSGRSKP*GSPRTSTATSSI 179
           HV +I  FLR  G + G   P GSP  S ++S +
Sbjct: 555 HVPRIADFLRRKGGIRGAGSPVGSPTVSLSSSPV 588


>UniRef50_Q5KH00 Cluster: Expressed protein; n=2; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 872

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 126 PYASPAAVPITYSALPSATYYVR*NKIIS 40
           PY SP AVP T  A PS T Y+   ++ S
Sbjct: 19  PYPSPPAVPFTCKASPSLTEYLHPGEVAS 47


>UniRef50_Q17S71 Cluster: RNA-dependent RNA polymerase; n=8;
           Luteoviridae|Rep: RNA-dependent RNA polymerase -
           Chickpea chlorotic stunt virus
          Length = 1093

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 168 DYVYTPGLVPPVISPYASPAAVPITYSALPSATY 67
           DY+ TPG VP V +    P  +P +   LP   Y
Sbjct: 47  DYLQTPGFVPYVYNLVEKPVTIPQSKLPLPELNY 80


>UniRef50_Q2JGX1 Cluster: Putative uncharacterized protein
           precursor; n=3; Frankia|Rep: Putative uncharacterized
           protein precursor - Frankia sp. (strain CcI3)
          Length = 266

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 156 TPGLVPPVISPYAS-PAAVPITYSALPSATYYVR 58
           T G  PP ++P A  P AVP   SA+P+  +Y R
Sbjct: 233 TGGSAPPPLAPPAPLPVAVPAATSAVPADPHYTR 266


>UniRef50_A1R6N6 Cluster: Putative uncharacterized protein; n=1;
           Arthrobacter aurescens TC1|Rep: Putative uncharacterized
           protein - Arthrobacter aurescens (strain TC1)
          Length = 270

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 251 LCWPCLWPLQALRQPQNQHRNFFHTQAWTTSI 156
           +CWPCLW    +RQ    H       AW+T++
Sbjct: 147 ICWPCLWEPHIVRQ-MLLHIETTTGSAWSTAV 177


>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
           carota|Rep: Glycine-rich protein - Daucus carota
           (Carrot)
          Length = 111

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 181 WKKLRCWFWGCLRAWSGQR 237
           W + RCW W  LR+W   R
Sbjct: 43  WWRCRCWIWSRLRSWCRSR 61


>UniRef50_Q16UN5 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1322

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 165 YVYTPGLVPPVISPYASPAAVPITYSALPS 76
           Y YTP    P  SPYASP      YS+LP+
Sbjct: 594 YKYTP---QPSTSPYASPTVANYRYSSLPT 620


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,604,993
Number of Sequences: 1657284
Number of extensions: 4527637
Number of successful extensions: 15155
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15132
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)