Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P06
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   2.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   2.2  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   2.2  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 311 FSTCTYSKQTTCPTNXSFSSL 249
           +ST  YS   T P    FSSL
Sbjct: 298 YSTIMYSNGVTFPQRNRFSSL 318


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 311 FSTCTYSKQTTCPTNXSFSSL 249
           +ST  YS   T P    FSSL
Sbjct: 298 YSTIMYSNGVTFPQRNRFSSL 318


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 129 SPYASPAAVPITYSALPSATYYV 61
           SPYA+ A     ++A PSAT  V
Sbjct: 125 SPYAALAIAAQYFNAKPSATVAV 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,783
Number of Sequences: 438
Number of extensions: 1198
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)