Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P04
         (396 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17CP7 Cluster: Putative uncharacterized protein; n=1; ...    70   2e-11
UniRef50_Q6IGW6 Cluster: HDC04748; n=1; Drosophila melanogaster|...    45   5e-04
UniRef50_Q4QPZ2 Cluster: IP05753p; n=2; Drosophila melanogaster|...    34   1.1  
UniRef50_A6WGB2 Cluster: Putative uncharacterized protein; n=1; ...    33   2.0  
UniRef50_Q5XBX5 Cluster: Integral membrane protein; n=25; Strept...    32   3.5  
UniRef50_Q7YX96 Cluster: Putative uncharacterized protein; n=2; ...    32   4.6  
UniRef50_Q22CE3 Cluster: Protozoan/cyanobacterial globin family ...    32   4.6  
UniRef50_Q1E2J4 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  
UniRef50_Q4N785 Cluster: Putative uncharacterized protein; n=2; ...    31   6.1  
UniRef50_Q4Q698 Cluster: Thiolase protein-like protein; n=7; Try...    31   8.1  

>UniRef50_Q17CP7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 52

 Score = 69.7 bits (163), Expect = 2e-11
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -1

Query: 270 LIMAKKGVVAFVKDFYYDPFKWSLVKSVGFFTVGVVIASECTGLEIMPAMPH 115
           ++      +AF K+ YYD +KW+LVKS   F VGV IA EC GLE+MPA+PH
Sbjct: 1   MVQKNNSFIAFFKNIYYDDYKWALVKSASLFLVGVRIAKECQGLELMPAVPH 52


>UniRef50_Q6IGW6 Cluster: HDC04748; n=1; Drosophila
           melanogaster|Rep: HDC04748 - Drosophila melanogaster
           (Fruit fly)
          Length = 52

 Score = 45.2 bits (102), Expect = 5e-04
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = -1

Query: 246 VAFVKDFYYDPFKWSLVKSVGFFTVGVVIASECTGLEIMPAM 121
           ++ V+  Y + F+W LVKS G F +GV +A E  G+E+MP++
Sbjct: 8   LSIVRSIYNNEFQWMLVKSYGLFFLGVRLAKEFVGVELMPSL 49


>UniRef50_Q4QPZ2 Cluster: IP05753p; n=2; Drosophila
           melanogaster|Rep: IP05753p - Drosophila melanogaster
           (Fruit fly)
          Length = 86

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -1

Query: 273 ELIMAKKGVVAFVKDFYYDPFKWSLVKSVGFFTVGVVIASECTGLEIMP 127
           +L++  + V+  +   Y D F W+ +KS G F++ + +A    G +++P
Sbjct: 37  QLLLMARAVLTII---YNDHFCWTFIKSYGLFSLAIPLAKYFDGFQVLP 82


>UniRef50_A6WGB2 Cluster: Putative uncharacterized protein; n=1;
           Kineococcus radiotolerans SRS30216|Rep: Putative
           uncharacterized protein - Kineococcus radiotolerans
           SRS30216
          Length = 1084

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = -1

Query: 387 SAGRFDRSNLKLHLKFSLSSGIIELSQVIVSKKQLPLFELIMAKKGVVAFVKDFYY 220
           SAG+FD+  L   L   L+  +   +  +    ++PL +L+++++G+ A + DF Y
Sbjct: 205 SAGQFDQQRLPHDLLARLAVAVRFHTPQVAETAKVPLAKLLVSERGLPALLNDFEY 260


>UniRef50_Q5XBX5 Cluster: Integral membrane protein; n=25;
           Streptococcus|Rep: Integral membrane protein -
           Streptococcus pyogenes serotype M6
          Length = 318

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 26/81 (32%), Positives = 44/81 (54%)
 Frame = -1

Query: 357 KLHLKFSLSSGIIELSQVIVSKKQLPLFELIMAKKGVVAFVKDFYYDPFKWSLVKSVGFF 178
           +LHL +++S+GII L  V+ ++K      L++A+  +++F   F      +SL    GF 
Sbjct: 23  QLHLDYAMSAGIIALLSVLDTRKS----SLVVARNRLLSFFLAFGIAMMCFSL---FGFT 75

Query: 177 TVGVVIASECTGLEIMPAMPH 115
           TVG +    C  L I+P + H
Sbjct: 76  TVGFM----CYLLIIIPLLYH 92


>UniRef50_Q7YX96 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 55

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -1

Query: 237 VKDFYYDPFKWSLVKSVGFFTVGVVIA 157
           V   Y DPF WS+ K V  F VGVV+A
Sbjct: 18  VNTVYNDPFFWSVFKGVIGFGVGVVVA 44


>UniRef50_Q22CE3 Cluster: Protozoan/cyanobacterial globin family
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Protozoan/cyanobacterial globin family protein -
           Tetrahymena thermophila SB210
          Length = 1156

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 330 SGIIELSQVIVSKKQLPLFELIMAKKGVVAFVKDFY 223
           S +IE  ++ +  + LPLFE I  +KGV   V  FY
Sbjct: 788 SNLIETQRMTIVTQSLPLFERIGGEKGVQQIVNRFY 823


>UniRef50_Q1E2J4 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 773

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 245 TTPFLAIISSNKGNCFLLTMT*DNSIIPEESENFKCNFRFDLSNRPAEF 391
           TTP LA I   +    L        I PE  E F+C+FR  L + P E+
Sbjct: 436 TTPLLATIHVLRSASQLAKALKSQVISPETLEKFECHFRMCLGSFPPEY 484


>UniRef50_Q4N785 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 835

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -1

Query: 252 GVVAFVKDFYYDPFKWSLVKSVGFFTVGVV 163
           GVV     F+Y P++ S VK +GF T+GV+
Sbjct: 157 GVVESGLSFFYVPYEHSAVKFLGFSTIGVM 186


>UniRef50_Q4Q698 Cluster: Thiolase protein-like protein; n=7;
           Trypanosomatidae|Rep: Thiolase protein-like protein -
           Leishmania major
          Length = 440

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 351 HLKFSLSSGIIELSQVIVSKKQLPLFELIMA-KKGVVAFVKDFYYDPFKW 205
           H    ++ G   +S   V   +   + L+MA +KGV++F K+  Y+P KW
Sbjct: 114 HADVVIAGGSDSVSNTEVPLPRAVTYGLMMAQRKGVMSFFKEAGYNPLKW 163


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,586,351
Number of Sequences: 1657284
Number of extensions: 5765361
Number of successful extensions: 12850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12848
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)