Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_P04
         (396 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023624-1|AAY85024.1|   86|Drosophila melanogaster IP05753p pro...    34   0.079
AE014298-3032|AAF50898.1|   58|Drosophila melanogaster CG15461-P...    34   0.079

>BT023624-1|AAY85024.1|   86|Drosophila melanogaster IP05753p
           protein.
          Length = 86

 Score = 33.9 bits (74), Expect = 0.079
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -1

Query: 273 ELIMAKKGVVAFVKDFYYDPFKWSLVKSVGFFTVGVVIASECTGLEIMP 127
           +L++  + V+  +   Y D F W+ +KS G F++ + +A    G +++P
Sbjct: 37  QLLLMARAVLTII---YNDHFCWTFIKSYGLFSLAIPLAKYFDGFQVLP 82


>AE014298-3032|AAF50898.1|   58|Drosophila melanogaster CG15461-PA
           protein.
          Length = 58

 Score = 33.9 bits (74), Expect = 0.079
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -1

Query: 273 ELIMAKKGVVAFVKDFYYDPFKWSLVKSVGFFTVGVVIASECTGLEIMP 127
           +L++  + V+  +   Y D F W+ +KS G F++ + +A    G +++P
Sbjct: 9   QLLLMARAVLTII---YNDHFCWTFIKSYGLFSLAIPLAKYFDGFQVLP 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,267,968
Number of Sequences: 53049
Number of extensions: 250958
Number of successful extensions: 433
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)