Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_P01
(768 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 39 7e-04
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 37 0.004
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 30 0.32
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 29 0.97
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 28 1.7
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 28 1.7
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.9
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 27 3.9
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 26 6.8
SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 6.8
SPBC409.05 |skp1|psh1, sph1|SCF ubiquitin ligase complex subunit... 25 9.0
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 39.1 bits (87), Expect = 7e-04
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = -2
Query: 569 RNGAARESMRS-GDSEAHNFQEYTYKKITPCDVCSQVLRGHTRQGLRCRLCKMNVHTDCM 393
R GA R+ S + H F ++ + +I C +C + L+ G++C C H C
Sbjct: 389 RQGAIRQRKESVHEVYGHKFLQHQFYQIMRCALCGEFLKNAA--GMQCIDCHYTCHKKCY 446
Query: 392 PQ-VGKCQTKSRLLRRQKSTSEIE--SHRV 312
P+ V KC +KS ++SE E +HR+
Sbjct: 447 PKVVTKCISKS----SDSASSEYEKINHRI 472
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 36.7 bits (81), Expect = 0.004
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 521 HNFQEYTYKKITPCDVCSQVLRGHTRQGLRCRLCKMNVHTDC 396
H+F+ ++K T C C +++ G +++G C+ C H C
Sbjct: 398 HDFKHVSFKLPTSCSYCREIIWGLSKRGCVCKNCGFKCHARC 439
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 30.3 bits (65), Expect = 0.32
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 483 LRCMFTSATRSHQTRSPLPFMQNERPYRLYATSRQMPN 370
L+ M TSA+R+ SPLP+++N RP A S ++ N
Sbjct: 210 LQNMSTSASRTPNDSSPLPYIEN-RPASSLAVSEKIQN 246
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 28.7 bits (61), Expect = 0.97
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +2
Query: 251 AVRKVSLSSAPIFHLRMQSL-----ELCETRFRKCFSVCARAGTLFGICLLVA-YNLYGR 412
A+ V S I+H + +L ELC F+KC + C R + C L++ +LYG
Sbjct: 146 AILCVVCDSLEIYHSNLSTLLPNNFELCIDVFQKCTTQCQRELIIKKACYLLSDVSLYGP 205
Query: 413 SF 418
F
Sbjct: 206 RF 207
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 668 LSSSSAGSMKNKWLKAFRSLKPPSAP--PPHVPDKRNGAARESMRSGDSEAHNFQEYTYK 495
L+SSSA M K+ R ++PP + PP + + + S S +SE NFQ Y
Sbjct: 106 LTSSSANYMT----KSERQMRPPKSYDFPPSQQVRPSTSRSPSYASYNSEEVNFQSYQDP 161
Query: 494 KITP 483
++ P
Sbjct: 162 RLLP 165
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 707 AAKADSASGVDRKLSSSSAGSMKNKWLKAFRSLKPPSAPPPHVPDKRNGAA 555
AA+ + S K +SS ++ + + S PPSAP P +P G A
Sbjct: 95 AARRIAESLQSTKATSSRTSYDHSEGITSTTSASPPSAPAPPLPPSSEGPA 145
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +2
Query: 80 TNYTTALRALPCHGRDSFNDIVPDGPNYIFIIFSC 184
+ Y++ R P H D++ DG Y+ SC
Sbjct: 154 SKYSSTTRIYPYHSLSQLTDLLTDGSFYVSTNISC 188
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 26.6 bits (56), Expect = 3.9
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 695 DSASGVDRKLSSSSAGSMKNKWLKAFRSLKPPSAPPPHVPDKRNGA-ARESMRSGDSEAH 519
DS R+ S S +N L A PPS+PPP D+ A E + D EA
Sbjct: 2 DSFRKRGRRDSESLPFESENSSLGATPLSLPPSSPPPEFSDEAAEALVEEDIEDLDGEAL 61
Query: 518 NFQE 507
+ ++
Sbjct: 62 DVED 65
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = -3
Query: 547 LCVQEIPRHTISKNIHTKKSHLAMYVHKCYEVTPDKVSAAVYAK*TSIQIVCHK*ANAKQ 368
+ V+E+ H I K I S + Y+ +TP A+Y ++I+ K N +
Sbjct: 30 ISVKEVAVHDIWKRIQAADSQIQSYIKSHGSLTPHPKEDALY---STIREEYQKAINIQN 86
Query: 367 SPGSCADRKAL 335
ADR L
Sbjct: 87 EKVQLADRARL 97
>SPBC26H8.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 482 CDVCSQVLRGHTRQGLRCRLCKMNVHTDCMPQVGKCQTK-SRLLRRQKSTSEIES 321
C VC + + G C CK + C+ Q KC++ + +Q+ T E E+
Sbjct: 60 CHVCHRKNNMRLKVGT-CESCKKHTCAICIRQCHKCESNVCSMCSKQERTFESEA 113
>SPBC409.05 |skp1|psh1, sph1|SCF ubiquitin ligase complex subunit
Skp1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 735 GCKSSERPIRGKSRQRFRGRSKIIFVFGRQYEEQMVK 625
GCK+ IRGKS + R I F + EEQ+ K
Sbjct: 117 GCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRK 153
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,366,294
Number of Sequences: 5004
Number of extensions: 73693
Number of successful extensions: 240
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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