Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_O19
         (659 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71460-1|CAA96077.1|  831|Homo sapiens vacuolar-type H(+)-ATPase...    31   4.8  
L78933-1|AAL77442.1|  831|Homo sapiens vacuolar-type H(+)-ATPase...    31   4.8  
BC032398-1|AAH32398.1|  837|Homo sapiens ATP6V0A1 protein protein.     31   4.8  
AK223554-1|BAD97274.1|  831|Homo sapiens ATPase, H+ transporting...    31   4.8  
BC109305-1|AAI09306.1|  840|Homo sapiens ATPase, H+ transporting...    30   6.4  
BC109304-1|AAI09305.1|  840|Homo sapiens ATPase, H+ transporting...    30   6.4  
AF245517-1|AAG11415.1|  840|Homo sapiens vacuolar proton pump 11...    30   6.4  
AY369208-1|AAQ73312.1|  956|Homo sapiens MAM domain-containing g...    30   8.4  
AY358125-1|AAQ88492.1|  937|Homo sapiens MAM-domain protein prot...    30   8.4  
AY328482-1|AAP97010.1|  571|Homo sapiens MAM domain containing 1...    30   8.4  

>Z71460-1|CAA96077.1|  831|Homo sapiens vacuolar-type H(+)-ATPase
           115 kDa subunit protein.
          Length = 831

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E  ++  KNE+ MF     GRYII+ + +F
Sbjct: 427 ESRILSQKNENEMFSTVFSGRYIILLMGVF 456


>L78933-1|AAL77442.1|  831|Homo sapiens vacuolar-type H(+)-ATPase
           protein.
          Length = 831

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E  ++  KNE+ MF     GRYII+ + +F
Sbjct: 427 ESRILSQKNENEMFSTVFSGRYIILLMGVF 456


>BC032398-1|AAH32398.1|  837|Homo sapiens ATP6V0A1 protein protein.
          Length = 837

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E  ++  KNE+ MF     GRYII+ + +F
Sbjct: 427 ESRILSQKNENEMFSTVFSGRYIILLMGVF 456


>AK223554-1|BAD97274.1|  831|Homo sapiens ATPase, H+ transporting,
           lysosomal V0 subunit a isoform 1 variant protein.
          Length = 831

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E  ++  KNE+ MF     GRYII+ + +F
Sbjct: 427 ESRILSQKNENEMFSTVFSGRYIILLMGVF 456


>BC109305-1|AAI09306.1|  840|Homo sapiens ATPase, H+ transporting,
           lysosomal V0 subunit a4 protein.
          Length = 840

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E+ L+  K ++ ++  F HGRY+I+ + IF
Sbjct: 429 ERRLLSQKTDNEIWNTFFHGRYLILLMGIF 458


>BC109304-1|AAI09305.1|  840|Homo sapiens ATPase, H+ transporting,
           lysosomal V0 subunit a4 protein.
          Length = 840

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E+ L+  K ++ ++  F HGRY+I+ + IF
Sbjct: 429 ERRLLSQKTDNEIWNTFFHGRYLILLMGIF 458


>AF245517-1|AAG11415.1|  840|Homo sapiens vacuolar proton pump 116
           kDa accessory subunit protein.
          Length = 840

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 500 EQFLIDFKNEDSMFXAFMHGRYIIMKLSIF 589
           E+ L+  K ++ ++  F HGRY+I+ + IF
Sbjct: 429 ERRLLSQKTDNEIWNTFFHGRYLILLMGIF 458


>AY369208-1|AAQ73312.1|  956|Homo sapiens MAM domain-containing
           glycosylphosphatidylinositol anchor 2 protein.
          Length = 956

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 12/20 (60%), Positives = 18/20 (90%), Gaps = 1/20 (5%)
 Frame = +2

Query: 188 DVVTYNLTEIVKPE-YKVSL 244
           +++TYNLTE++KPE Y+V L
Sbjct: 698 ELITYNLTELIKPEAYEVRL 717


>AY358125-1|AAQ88492.1|  937|Homo sapiens MAM-domain protein
           protein.
          Length = 937

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 12/20 (60%), Positives = 18/20 (90%), Gaps = 1/20 (5%)
 Frame = +2

Query: 188 DVVTYNLTEIVKPE-YKVSL 244
           +++TYNLTE++KPE Y+V L
Sbjct: 679 ELITYNLTELIKPEAYEVRL 698


>AY328482-1|AAP97010.1|  571|Homo sapiens MAM domain containing 1
           protein.
          Length = 571

 Score = 29.9 bits (64), Expect = 8.4
 Identities = 12/20 (60%), Positives = 18/20 (90%), Gaps = 1/20 (5%)
 Frame = +2

Query: 188 DVVTYNLTEIVKPE-YKVSL 244
           +++TYNLTE++KPE Y+V L
Sbjct: 313 ELITYNLTELIKPEAYEVRL 332


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,517,173
Number of Sequences: 237096
Number of extensions: 1201959
Number of successful extensions: 1313
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)